Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0492 |
Symbol | ampG |
ID | 6484100 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 502995 |
End bp | 504476 |
Gene Length | 1482 bp |
Protein Length | 493 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642735913 |
Product | muropeptide transporter |
Protein accession | YP_002039687 |
Protein GI | 194446087 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00901] AmpG-related permease |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00144184 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.00023941 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCCTATGT CAAGTCAATA TTTACGTATT TTCCAGCAAC CGCGTTCAGC CATTCTGCTG ATATTGGGTT TTGCCTCCGG TCTCCCGCTG GCGCTCACTT CCGGTACGCT ACAGGCGTGG ATGACCGTCG AGAATATCGA TCTTAAAACG ATTGGCTTCT TCTCGCTGGT TGGTCAGGCC TATGTGTTTA AGTTTCTCTG GTCCCCGCTG ATGGACCGCT ACACGCCGCC TTTTTTAGGT CGTCGTCGCG GTTGGTTACT CGCCACCCAA CTGTTGTTAC TGGCGGCGAT TGCGGCGATG GGCTTTCTTG AACCCGGCAC GCAGCTACGC TGGATGGCGG CGCTGGCGGT GGTGATTGCT TTTTGCTCCG CCTCGCAGGA TATCGTGTTC GACGCCTGGA AAACCGATGT TTTACCCGCA GAAGAACGCG GCGCTGGCGC GGCAATCAGC GTGCTTGGCT ACCGGTTGGG GATGCTGGTT TCCGGCGGAC TGGCGCTATG GCTGGCCGAT CGCTGGCTCG GCTGGCAGGG CATGTACTGG CTGATGGCGG CATTGCTGAT CCCCTGCATT ATCGCCACCT TACTGGCGCC GGAACCGACC GATACTATCC CGTCCCCGAA ATCGCTGGAA CAGGCCGTCG TCGCGCCGCT ACGCGATTTC TTTGGCCGTA ATAACGCCTG GCTGATTTTA CTGCTCATTG TGCTTTATAA ACTGGGTGAC GCCTTCGCCA TGAGCCTGAC CACCACCTTT TTGATTCGCG GCGTCGGCTT TGACGCCGGC GAAGTCGGTG TGGTCAATAA AACGCTGGGC CTGCTGGCGA CGATCGTCGG CGCGTTATAC GGCGGCATAT TAATGCAGCG TCTTTCGCTG TTTCGCGCGC TGCTGATTTT CGGCATTTTG CAAGGCGCGT CCAACGCCGG TTACTGGTTG CTCTCCATTA CCGATAAAAA TATGTTCAGC ATGGGCGCGG CGGTCTTTTT CGAAAATCTG TGCGGCGGGA TGGGTACTGC CGCCTTTGTC GCCTTATTAA TGACGCTATG TAATAAGTCG TTTTCCGCAA CACAGTTTGC CCTACTGTCG GCCCTCTCCG CAGTAGGCCG CGTTTATGTT GGTCCCGTAG CGGGCTGGTT CGTTGAAGCG CACGGCTGGC CGACATTCTA CCTCTTCTCG GTTGTCGCCG CCGTTCCCGG GCTGTTACTG TTGCTGGTCT GTCGGCAAAC GCTGGAATAT AGCTGGCAGA ACGAGCGTTT CATTCCCCGC ACGCAATACC GTGGCGCCTA CAATTTCGCG CTTTCAATCC TGCTCGCGGG CGTCGCTTTG CTGGCGGTCT GGGTACTCCT GCTGACCATG AACGCGTTGG ATTACACTAA CTTCTCATTC CTGTCCGGAT TGCTTGAAAC TGCGGTAGCG GTTGCCGTGT GCGGCATTGT CTTTGGCGGG TTGCTGGACT ACCTGGCGCT ACGAAAAACA CGCCTGCTCT AA
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Protein sequence | MPMSSQYLRI FQQPRSAILL ILGFASGLPL ALTSGTLQAW MTVENIDLKT IGFFSLVGQA YVFKFLWSPL MDRYTPPFLG RRRGWLLATQ LLLLAAIAAM GFLEPGTQLR WMAALAVVIA FCSASQDIVF DAWKTDVLPA EERGAGAAIS VLGYRLGMLV SGGLALWLAD RWLGWQGMYW LMAALLIPCI IATLLAPEPT DTIPSPKSLE QAVVAPLRDF FGRNNAWLIL LLIVLYKLGD AFAMSLTTTF LIRGVGFDAG EVGVVNKTLG LLATIVGALY GGILMQRLSL FRALLIFGIL QGASNAGYWL LSITDKNMFS MGAAVFFENL CGGMGTAAFV ALLMTLCNKS FSATQFALLS ALSAVGRVYV GPVAGWFVEA HGWPTFYLFS VVAAVPGLLL LLVCRQTLEY SWQNERFIPR TQYRGAYNFA LSILLAGVAL LAVWVLLLTM NALDYTNFSF LSGLLETAVA VAVCGIVFGG LLDYLALRKT RLL
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