Gene SNSL254_A0492 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0492 
SymbolampG 
ID6484100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp502995 
End bp504476 
Gene Length1482 bp 
Protein Length493 aa 
Translation table11 
GC content57% 
IMG OID642735913 
Productmuropeptide transporter 
Protein accessionYP_002039687 
Protein GI194446087 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00901] AmpG-related permease 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00144184 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.00023941 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCCTATGT CAAGTCAATA TTTACGTATT TTCCAGCAAC CGCGTTCAGC CATTCTGCTG 
ATATTGGGTT TTGCCTCCGG TCTCCCGCTG GCGCTCACTT CCGGTACGCT ACAGGCGTGG
ATGACCGTCG AGAATATCGA TCTTAAAACG ATTGGCTTCT TCTCGCTGGT TGGTCAGGCC
TATGTGTTTA AGTTTCTCTG GTCCCCGCTG ATGGACCGCT ACACGCCGCC TTTTTTAGGT
CGTCGTCGCG GTTGGTTACT CGCCACCCAA CTGTTGTTAC TGGCGGCGAT TGCGGCGATG
GGCTTTCTTG AACCCGGCAC GCAGCTACGC TGGATGGCGG CGCTGGCGGT GGTGATTGCT
TTTTGCTCCG CCTCGCAGGA TATCGTGTTC GACGCCTGGA AAACCGATGT TTTACCCGCA
GAAGAACGCG GCGCTGGCGC GGCAATCAGC GTGCTTGGCT ACCGGTTGGG GATGCTGGTT
TCCGGCGGAC TGGCGCTATG GCTGGCCGAT CGCTGGCTCG GCTGGCAGGG CATGTACTGG
CTGATGGCGG CATTGCTGAT CCCCTGCATT ATCGCCACCT TACTGGCGCC GGAACCGACC
GATACTATCC CGTCCCCGAA ATCGCTGGAA CAGGCCGTCG TCGCGCCGCT ACGCGATTTC
TTTGGCCGTA ATAACGCCTG GCTGATTTTA CTGCTCATTG TGCTTTATAA ACTGGGTGAC
GCCTTCGCCA TGAGCCTGAC CACCACCTTT TTGATTCGCG GCGTCGGCTT TGACGCCGGC
GAAGTCGGTG TGGTCAATAA AACGCTGGGC CTGCTGGCGA CGATCGTCGG CGCGTTATAC
GGCGGCATAT TAATGCAGCG TCTTTCGCTG TTTCGCGCGC TGCTGATTTT CGGCATTTTG
CAAGGCGCGT CCAACGCCGG TTACTGGTTG CTCTCCATTA CCGATAAAAA TATGTTCAGC
ATGGGCGCGG CGGTCTTTTT CGAAAATCTG TGCGGCGGGA TGGGTACTGC CGCCTTTGTC
GCCTTATTAA TGACGCTATG TAATAAGTCG TTTTCCGCAA CACAGTTTGC CCTACTGTCG
GCCCTCTCCG CAGTAGGCCG CGTTTATGTT GGTCCCGTAG CGGGCTGGTT CGTTGAAGCG
CACGGCTGGC CGACATTCTA CCTCTTCTCG GTTGTCGCCG CCGTTCCCGG GCTGTTACTG
TTGCTGGTCT GTCGGCAAAC GCTGGAATAT AGCTGGCAGA ACGAGCGTTT CATTCCCCGC
ACGCAATACC GTGGCGCCTA CAATTTCGCG CTTTCAATCC TGCTCGCGGG CGTCGCTTTG
CTGGCGGTCT GGGTACTCCT GCTGACCATG AACGCGTTGG ATTACACTAA CTTCTCATTC
CTGTCCGGAT TGCTTGAAAC TGCGGTAGCG GTTGCCGTGT GCGGCATTGT CTTTGGCGGG
TTGCTGGACT ACCTGGCGCT ACGAAAAACA CGCCTGCTCT AA
 
Protein sequence
MPMSSQYLRI FQQPRSAILL ILGFASGLPL ALTSGTLQAW MTVENIDLKT IGFFSLVGQA 
YVFKFLWSPL MDRYTPPFLG RRRGWLLATQ LLLLAAIAAM GFLEPGTQLR WMAALAVVIA
FCSASQDIVF DAWKTDVLPA EERGAGAAIS VLGYRLGMLV SGGLALWLAD RWLGWQGMYW
LMAALLIPCI IATLLAPEPT DTIPSPKSLE QAVVAPLRDF FGRNNAWLIL LLIVLYKLGD
AFAMSLTTTF LIRGVGFDAG EVGVVNKTLG LLATIVGALY GGILMQRLSL FRALLIFGIL
QGASNAGYWL LSITDKNMFS MGAAVFFENL CGGMGTAAFV ALLMTLCNKS FSATQFALLS
ALSAVGRVYV GPVAGWFVEA HGWPTFYLFS VVAAVPGLLL LLVCRQTLEY SWQNERFIPR
TQYRGAYNFA LSILLAGVAL LAVWVLLLTM NALDYTNFSF LSGLLETAVA VAVCGIVFGG
LLDYLALRKT RLL