Gene SNSL254_A3237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3237 
Symbol 
ID6483197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand- 
Start bp3151015 
End bp3152217 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content59% 
IMG OID642738537 
Productlysophospholipid transporter LplT 
Protein accessionYP_002042259 
Protein GI194442580 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.00000025684 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAGTGAGT CAGTACGTAC TAACACCTCC ATCTGGTCGA AAGGGATGCT GTCGGTGATT 
GTCGCGCAGT TTCTCTCGGC TTTTGGCGAT AATGCGCTGC TGTTCGCGAC GCTGGCACTG 
CTGAAAGCTC AGTTTTACCC GGACTGGAGC CAGCCTGTTT TGCAAATGGT GTTTGTGGGC 
GCTTACATTC TTTTTGCGCC GTTTGTCGGC CAGATAGCGG ACAGCTTTGC CAAAGGCCGG 
GTGATGATGG TCGCCAATGG TCTTAAACTG GCGGGAGCGG CAGGTATCTG CCTCGGCATA 
AATCCTTTTG TCGGTTATAC GTTGGTCGGG ATTGGCGCGG CGGCTTATTC TCCGGCGAAA 
TACGGTATTC TGGGCGAACT GACGACGGGC GATAAGCTGG TGAAAGCCAA TGGCCTGATG 
GAAGCCTCTA CGATTGCGGC GATTTTGCTC GGTTCCGTCG CGGGCGGCGT ATTGGCCGAC 
TGGCATGTCA TCGCTGCGCT GGTTGCCTGC GCGTTGGCCT ACGCTGGCGC AGTGGCGGCG 
AACCTGTTTA TCCCGAAGCT TGTGGCGGCG CGTCCAGGAC AATCCTGGCG GTTGTCGGCG 
ATGACGCGTA GTTTCTTCAG CGCTTGCGTT GTCCTTTGGC GTAACGGTGA AACGCGTTTT 
TCGCTGGTGG GGACCGGGCT ATTCTGGGGC GCAGGCGTGA CGCTGCGTTT TCTGCTGGTG 
CTGTGGGTGC CGGTGGCGCT GGGGATTACG GATAACGCCA CGCCGACTTA CCTGAACGCC 
ATGGTGGCGG TAGGCATTGT GGTCGGCGCG GGCGCGGCGG CAAAACTGGT GACGCTGGAG 
ACCGTATCGC GCTGTATGCC CGCCGGGATT TTGATTGGCG TTGTGGTTGC GATCTTCTCA 
TTACAGCACG CATTGCTGCC TGCTTATGCC TTGTTGCTGT TGATAGGTAT GCTGGGCGGC 
TTTTTTGTGG TGCCGCTCAA CGCTTTGCTC CAGGAGCGCG GTAAGAAGAG CGTTGGCGCC 
GGGAATGCCA TTGCCGTACA AAATCTGGGC GAGAATAGCG CCATGCTATT AATGCTGGGA 
CTGTACTCGC TGGCGGTGCT GGTTGGCGTT CCGGCAGTGG CGATAGGTAT CGGCTTTGGC 
GTGCTGTTCG CGCTGGCGAT CGCGGCGCTG TGGATCTGGC AGCGCCGGCA GGCATCATAC 
TGA
 
Protein sequence
MSESVRTNTS IWSKGMLSVI VAQFLSAFGD NALLFATLAL LKAQFYPDWS QPVLQMVFVG 
AYILFAPFVG QIADSFAKGR VMMVANGLKL AGAAGICLGI NPFVGYTLVG IGAAAYSPAK 
YGILGELTTG DKLVKANGLM EASTIAAILL GSVAGGVLAD WHVIAALVAC ALAYAGAVAA 
NLFIPKLVAA RPGQSWRLSA MTRSFFSACV VLWRNGETRF SLVGTGLFWG AGVTLRFLLV 
LWVPVALGIT DNATPTYLNA MVAVGIVVGA GAAAKLVTLE TVSRCMPAGI LIGVVVAIFS 
LQHALLPAYA LLLLIGMLGG FFVVPLNALL QERGKKSVGA GNAIAVQNLG ENSAMLLMLG 
LYSLAVLVGV PAVAIGIGFG VLFALAIAAL WIWQRRQASY