More than 300 homologs were found in PanDaTox collection
for query gene Vapar_6218 on replicon NC_012792
Organism: Variovorax paradoxus S110



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012792  Vapar_6218  acyl-CoA dehydrogenase domain protein  100 
 
 
390 aa  796    Variovorax paradoxus S110  Bacteria  normal  0.823092  n/a   
 
 
-
 
NC_007973  Rmet_1816  acyl-CoA dehydrogenase-like protein  78.59 
 
 
429 aa  622  1e-177  Cupriavidus metallidurans CH34  Bacteria  normal  0.0196409  hitchhiker  0.006326 
 
 
-
 
NC_008786  Veis_2500  isovaleryl-CoA dehydrogenase  72.66 
 
 
388 aa  577  1.0000000000000001e-163  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.353952  normal 
 
 
-
 
NC_010676  Bphyt_4085  acyl-CoA dehydrogenase domain protein  69.09 
 
 
398 aa  531  1e-149  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B3882  butyryl-CoA dehydrogenase  66.32 
 
 
395 aa  521  1e-147  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_1165  acyl-CoA dehydrogenase domain-containing protein  65.42 
 
 
389 aa  501  1e-141  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_3683  acyl-CoA dehydrogenase domain-containing protein  62.27 
 
 
384 aa  488  1e-137  Burkholderia phymatum STM815  Bacteria  normal  normal  0.685138 
 
 
-
 
NC_009656  PSPA7_3642  putative acyl-CoA dehydrogenase  62.8 
 
 
384 aa  481  1e-134  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_43420  putative acyl-CoA dehydrogenase  62.53 
 
 
384 aa  480  1e-134  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0779209  normal 
 
 
-
 
NC_007509  Bcep18194_C7329  Acyl-CoA dehydrogenase  58.84 
 
 
383 aa  460  9.999999999999999e-129  Burkholderia sp. 383  Bacteria  normal  normal  0.948773 
 
 
-
 
NC_007969  Pcryo_1233  acyl-CoA dehydrogenase-like  57.33 
 
 
384 aa  459  9.999999999999999e-129  Psychrobacter cryohalolentis K5  Bacteria  normal  0.831269  normal  0.440096 
 
 
-
 
NC_008686  Pden_0198  butyryl-CoA dehydrogenase  59.32 
 
 
386 aa  460  9.999999999999999e-129  Paracoccus denitrificans PD1222  Bacteria  normal  0.286709  normal 
 
 
-
 
NC_007204  Psyc_1172  acyl-CoA dehydrogenase  57.07 
 
 
384 aa  457  1e-127  Psychrobacter arcticus 273-4  Bacteria  normal  normal  0.336122 
 
 
-
 
NC_004311  BRA0220  acyl-CoA dehydrogenase  57.52 
 
 
384 aa  446  1.0000000000000001e-124  Brucella suis 1330  Bacteria  normal  0.0793985  n/a   
 
 
-
 
NC_008782  Ajs_0130  acyl-CoA dehydrogenase domain-containing protein  56.65 
 
 
385 aa  439  9.999999999999999e-123  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_0148  acyl-CoA dehydrogenase domain protein  56.65 
 
 
385 aa  440  9.999999999999999e-123  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_0176  acyl-CoA dehydrogenase domain-containing protein  57.71 
 
 
385 aa  441  9.999999999999999e-123  Delftia acidovorans SPH-1  Bacteria  normal  0.142689  normal 
 
 
-
 
NC_010338  Caul_0274  acyl-CoA dehydrogenase domain-containing protein  57.44 
 
 
382 aa  433  1e-120  Caulobacter sp. K31  Bacteria  normal  0.630772  normal  0.481537 
 
 
-
 
NC_010338  Caul_0413  acyl-CoA dehydrogenase domain-containing protein  56.96 
 
 
382 aa  429  1e-119  Caulobacter sp. K31  Bacteria  normal  0.204955  normal 
 
 
-
 
NC_004311  BRA1088  acyl-CoA dehydrogenase  53.42 
 
 
380 aa  423  1e-117  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_0909  acyl-CoA dehydrogenase domain-containing protein  57.71 
 
 
388 aa  423  1e-117  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_1078  acyl-CoA dehydrogenase domain-containing protein  51.83 
 
 
383 aa  413  1e-114  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_012857  Rpic12D_3467  acyl-CoA dehydrogenase domain protein  52.47 
 
 
385 aa  395  1e-109  Ralstonia pickettii 12D  Bacteria  normal  normal  0.0842785 
 
 
-
 
NC_010678  Rpic_4539  acyl-CoA dehydrogenase domain protein  52.47 
 
 
385 aa  395  1e-109  Ralstonia pickettii 12J  Bacteria  normal  0.452852  normal  0.739278 
 
 
-
 
NC_003296  RS01762  putative acyl-CoA dehydrogenase oxidoreductase protein  53.51 
 
 
385 aa  394  1e-108  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.272038 
 
 
-
 
NC_010524  Lcho_0847  acyl-CoA dehydrogenase domain-containing protein  52.73 
 
 
386 aa  390  1e-107  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_010524  Lcho_1191  acyl-CoA dehydrogenase domain-containing protein  51.16 
 
 
386 aa  389  1e-107  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_008781  Pnap_2129  Acyl-CoA dehydrogenase  50.91 
 
 
386 aa  385  1e-106  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.0260778 
 
 
-
 
NC_007974  Rmet_5908  acyl-CoA dehydrogenase-like protein  51.43 
 
 
385 aa  386  1e-106  Cupriavidus metallidurans CH34  Bacteria  normal  0.276142  normal 
 
 
-
 
NC_007348  Reut_B5319  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  51.17 
 
 
385 aa  384  1e-105  Ralstonia eutropha JMP134  Bacteria  normal  0.398534  n/a   
 
 
-
 
NC_009484  Acry_1556  acyl-CoA dehydrogenase domain-containing protein  51.31 
 
 
386 aa  378  1e-104  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_3930  acyl-CoA dehydrogenase domain-containing protein  52.39 
 
 
385 aa  377  1e-103  Frankia sp. EAN1pec  Bacteria  normal  normal  0.0411302 
 
 
-
 
NC_009921  Franean1_2710  acyl-CoA dehydrogenase domain-containing protein  49.73 
 
 
395 aa  367  1e-100  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_4367  acyl-CoA dehydrogenase domain protein  51.06 
 
 
418 aa  365  1e-99  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_1375  acyl-CoA dehydrogenase domain protein  49.06 
 
 
384 aa  360  3e-98  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_4184  acyl-CoA dehydrogenase domain protein  49.86 
 
 
390 aa  341  1e-92  Gordonia bronchialis DSM 43247  Bacteria  normal  0.948009  n/a   
 
 
-
 
NC_007794  Saro_1224  acyl-CoA dehydrogenase-like  45.36 
 
 
394 aa  340  2e-92  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.0161366  n/a   
 
 
-
 
NC_008048  Sala_3010  acyl-CoA dehydrogenase-like protein  46.15 
 
 
387 aa  334  2e-90  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal  0.157219 
 
 
-
 
NC_009338  Mflv_4370  acyl-CoA dehydrogenase domain-containing protein  45.82 
 
 
404 aa  324  2e-87  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_1974  acyl-CoA dehydrogenase domain-containing protein  45.55 
 
 
392 aa  320  1.9999999999999998e-86  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.204851  normal 
 
 
-
 
NC_013159  Svir_26310  acyl-CoA dehydrogenase  46.05 
 
 
394 aa  315  9e-85  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.953761 
 
 
-
 
NC_008146  Mmcs_1756  acyl-CoA dehydrogenase-like protein  45.53 
 
 
391 aa  310  2e-83  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_1737  acyl-CoA dehydrogenase domain-containing protein  45.53 
 
 
391 aa  310  2e-83  Mycobacterium sp. JLS  Bacteria  normal  0.375234  normal 
 
 
-
 
NC_008705  Mkms_1803  acyl-CoA dehydrogenase domain-containing protein  45.53 
 
 
391 aa  310  2e-83  Mycobacterium sp. KMS  Bacteria  normal  0.992024  normal  0.411519 
 
 
-
 
NC_013205  Aaci_0155  acyl-CoA dehydrogenase domain protein  42.44 
 
 
388 aa  307  3e-82  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  hitchhiker  0.000000954759  n/a   
 
 
-
 
NC_008025  Dgeo_0428  acyl-CoA dehydrogenase-like protein  44.33 
 
 
380 aa  300  2e-80  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.871589  normal  0.2576 
 
 
-
 
NC_013411  GYMC61_1052  acyl-CoA dehydrogenase domain protein  41.91 
 
 
386 aa  299  4e-80  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011830  Dhaf_2865  acyl-CoA dehydrogenase domain protein  43.53 
 
 
389 aa  289  5.0000000000000004e-77  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_3342  acyl-CoA dehydrogenase domain protein  41.16 
 
 
379 aa  278  1e-73  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_2369  acyl-CoA dehydrogenase-like  41.51 
 
 
380 aa  273  5.000000000000001e-72  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_008261  CPF_2584  butyryl-CoA dehydrogenase  40.55 
 
 
379 aa  271  1e-71  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_2286  butyryl-CoA dehydrogenase  40.55 
 
 
379 aa  271  1e-71  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_002950  PG1076  acyl-CoA dehydrogenase, short-chain specific  40.11 
 
 
379 aa  270  2.9999999999999997e-71  Porphyromonas gingivalis W83  Bacteria  n/a    normal  0.228764 
 
 
-
 
NC_009674  Bcer98_3863  acyl-CoA dehydrogenase domain-containing protein  43.82 
 
 
376 aa  268  1e-70  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_1288  acyl-CoA dehydrogenase domain protein  38.68 
 
 
379 aa  268  1e-70  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.751821 
 
 
-
 
NC_008009  Acid345_1131  butyryl-CoA dehydrogenase  39.3 
 
 
392 aa  266  4e-70  Candidatus Koribacter versatilis Ellin345  Bacteria  hitchhiker  0.00519609  hitchhiker  0.000110962 
 
 
-
 
NC_011772  BCG9842_B5487  acyl-CoA dehydrogenase  43.24 
 
 
381 aa  266  5e-70  Bacillus cereus G9842  Bacteria  normal  0.0302943  hitchhiker  1.44799e-22 
 
 
-
 
NC_009253  Dred_0402  acyl-CoA dehydrogenase domain-containing protein  38.54 
 
 
380 aa  265  8e-70  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_013171  Apre_1356  acyl-CoA dehydrogenase domain protein  41.42 
 
 
379 aa  265  8e-70  Anaerococcus prevotii DSM 20548  Bacteria  unclonable  0.00000000100384  n/a   
 
 
-
 
NC_013061  Phep_0837  acyl-CoA dehydrogenase domain protein  38.01 
 
 
390 aa  265  1e-69  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_011658  BCAH187_A5520  acyl-CoA dehydrogenase  42.94 
 
 
381 aa  264  2e-69  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0714  acyl-CoA dehydrogenase domain-containing protein  40.86 
 
 
388 aa  264  2e-69  Thermobispora bispora DSM 43833  Bacteria  normal  0.114203  normal  0.0860013 
 
 
-
 
NC_013510  Tcur_2589  acyl-CoA dehydrogenase domain protein  41.64 
 
 
390 aa  264  2e-69  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.0000683478  n/a   
 
 
-
 
NC_008255  CHU_3827  bytyryl-CoA dehydrogenase (short-chain-acyl-CoA dehydrogenase)  40.61 
 
 
379 aa  264  2e-69  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_4115  acyl-CoA dehydrogenase domain protein  41.64 
 
 
390 aa  264  2e-69  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A5465  acyl-CoA dehydrogenase  42.94 
 
 
381 aa  264  2e-69  Bacillus cereus B4264  Bacteria  hitchhiker  0.000680329  n/a   
 
 
-
 
NC_003909  BCE_5473  acyl-CoA dehydrogenase  42.94 
 
 
376 aa  263  3e-69  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_3527  acyl-CoA dehydrogenase domain protein  39.46 
 
 
386 aa  263  3e-69  Spirosoma linguale DSM 74  Bacteria  normal  0.496474  normal 
 
 
-
 
NC_007643  Rru_A1948  isovaleryl-CoA dehydrogenase  40.77 
 
 
387 aa  263  4e-69  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.113187  n/a   
 
 
-
 
NC_011773  BCAH820_5435  acyl-CoA dehydrogenase  42.65 
 
 
376 aa  262  6.999999999999999e-69  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.000000000529924 
 
 
-
 
NC_005957  BT9727_5026  short-chain acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase  42.65 
 
 
376 aa  262  6.999999999999999e-69  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS5191  acyl-CoA dehydrogenase  42.65 
 
 
376 aa  261  1e-68  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_3862  acyl-CoA dehydrogenase domain-containing protein  39.78 
 
 
379 aa  261  1e-68  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5587  acyl-CoA dehydrogenase  42.65 
 
 
376 aa  261  1e-68  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_009718  Fnod_0585  acyl-CoA dehydrogenase domain-containing protein  38.21 
 
 
379 aa  261  1e-68  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_1881  butyryl-CoA dehydrogenase  38.95 
 
 
379 aa  261  2e-68  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.593492  normal  0.222475 
 
 
-
 
NC_010184  BcerKBAB4_5140  acyl-CoA dehydrogenase domain-containing protein  42.65 
 
 
376 aa  260  2e-68  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_0684  acyl-CoA dehydrogenase domain-containing protein  40.33 
 
 
379 aa  260  3e-68  Burkholderia phymatum STM815  Bacteria  normal  0.456474  normal  0.877291 
 
 
-
 
NC_006274  BCZK5042  short-chain acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase  42.35 
 
 
376 aa  259  4e-68  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_3693  isovaleryl-CoA dehydrogenase  39.57 
 
 
390 aa  259  5.0000000000000005e-68  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_5139  acyl-CoA dehydrogenase domain-containing protein  38.95 
 
 
379 aa  259  7e-68  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A5464  acyl-CoA dehydrogenase  38.67 
 
 
379 aa  258  9e-68  Bacillus cereus B4264  Bacteria  unclonable  0.0000608426  n/a   
 
 
-
 
NC_013411  GYMC61_3451  acyl-CoA dehydrogenase domain protein  41.96 
 
 
377 aa  257  2e-67  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013525  Tter_0364  acyl-CoA dehydrogenase domain protein  38.62 
 
 
386 aa  258  2e-67  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_012918  GM21_1386  acyl-CoA dehydrogenase domain protein  39.51 
 
 
385 aa  258  2e-67  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011831  Cagg_0202  acyl-CoA dehydrogenase domain protein  41.8 
 
 
382 aa  257  2e-67  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.221874  normal 
 
 
-
 
NC_007925  RPC_4263  acyl-CoA dehydrogenase-like  38.59 
 
 
390 aa  256  4e-67  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.662141  normal  0.561312 
 
 
-
 
NC_005957  BT9727_5025  butyryl-CoA dehydrogenase (short-chain acyl-CoA dehydrogenase)  38.95 
 
 
379 aa  256  6e-67  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_3822  acyl-CoA dehydrogenase domain protein  40.38 
 
 
379 aa  256  6e-67  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.962066  normal  0.565208 
 
 
-
 
NC_011772  BCG9842_B5488  acyl-CoA dehydrogenase  38.12 
 
 
379 aa  256  6e-67  Bacillus cereus G9842  Bacteria  normal  0.270181  hitchhiker  1.62736e-22 
 
 
-
 
NC_010501  PputW619_3455  acyl-CoA dehydrogenase domain-containing protein  39.95 
 
 
375 aa  255  9e-67  Pseudomonas putida W619  Bacteria  normal  normal  0.129524 
 
 
-
 
NC_011773  BCAH820_5434  acyl-CoA dehydrogenase  38.67 
 
 
379 aa  255  9e-67  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.0000000000000286159 
 
 
-
 
NC_013441  Gbro_1029  acyl-CoA dehydrogenase domain protein  36.78 
 
 
387 aa  254  1.0000000000000001e-66  Gordonia bronchialis DSM 43247  Bacteria  normal  0.239684  n/a   
 
 
-
 
NC_009675  Anae109_2136  acyl-CoA dehydrogenase domain-containing protein  40.82 
 
 
380 aa  255  1.0000000000000001e-66  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.281355 
 
 
-
 
NC_014230  CA2559_06620  butyryl-CoA dehydrogenase  38.74 
 
 
380 aa  254  1.0000000000000001e-66  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_6291  acyl-CoA dehydrogenase domain protein  39.01 
 
 
379 aa  254  1.0000000000000001e-66  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_009616  Tmel_0656  acyl-CoA dehydrogenase domain-containing protein  36.99 
 
 
380 aa  254  1.0000000000000001e-66  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5586  acyl-CoA dehydrogenase  38.67 
 
 
379 aa  255  1.0000000000000001e-66  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_013171  Apre_0505  acyl-CoA dehydrogenase domain protein  36.6 
 
 
561 aa  255  1.0000000000000001e-66  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_3281  acyl-CoA dehydrogenase-like  38.67 
 
 
395 aa  255  1.0000000000000001e-66  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
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