More than 300 homologs were found in PanDaTox collection
for query gene Rmet_2726 on replicon NC_007973
Organism: Cupriavidus metallidurans CH34



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007973  Rmet_2726  sugar transferase  100 
 
 
197 aa  396  1e-109  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_1126  Undecaprenyl-phosphate galactose phosphotransferase  72.08 
 
 
201 aa  294  5e-79  Thauera sp. MZ1T  Bacteria  normal  0.0875109  n/a   
 
 
-
 
NC_012791  Vapar_1934  Undecaprenyl-phosphate galactose phosphotransferase  72.92 
 
 
199 aa  292  2e-78  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3034  undecaprenyl-phosphate galactose phosphotransferase  72.96 
 
 
197 aa  290  1e-77  Acidovorax sp. JS42  Bacteria  normal  0.104666  normal 
 
 
-
 
NC_003296  RS02342  glycosyl transferase transmembrane protein  70.05 
 
 
203 aa  275  2e-73  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.0378569 
 
 
-
 
NC_007348  Reut_B5365  undecaprenyl-phosphate galactosephosphotransferase  71.43 
 
 
205 aa  275  2e-73  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007969  Pcryo_0636  undecaprenyl-phosphate galactosephosphotransferase  65.98 
 
 
207 aa  275  3e-73  Psychrobacter cryohalolentis K5  Bacteria  normal  0.678977  normal  0.34007 
 
 
-
 
NC_012793  GWCH70_3256  Undecaprenyl-phosphate galactose phosphotransferase  62.94 
 
 
207 aa  270  1e-71  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A2483  sugar transferase  61.73 
 
 
219 aa  265  4e-70  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_1698  undecaprenyl-phosphate galactose phosphotransferase  63.92 
 
 
204 aa  265  4e-70  Geobacter uraniireducens Rf4  Bacteria  normal  0.965123  n/a   
 
 
-
 
NC_010184  BcerKBAB4_3389  sugar transferase  60.71 
 
 
204 aa  255  2e-67  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.251832  n/a   
 
 
-
 
NC_009523  RoseRS_4262  undecaprenyl-phosphate galactose phosphotransferase  62.94 
 
 
206 aa  255  4e-67  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_010831  Cphamn1_0384  sugar transferase  62.76 
 
 
202 aa  254  4e-67  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal 
 
 
-
 
NC_011661  Dtur_0586  Undecaprenyl-phosphate galactose phosphotransferase  62.56 
 
 
206 aa  254  5e-67  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_1345  undecaprenyl-phosphate galactose phosphotransferase  61.93 
 
 
206 aa  251  4.0000000000000004e-66  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.940885 
 
 
-
 
NC_007519  Dde_0362  lipopolysaccharide synthesis sugar transferase  62.05 
 
 
598 aa  249  2e-65  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_4005  sugar transferase  65.13 
 
 
206 aa  243  9.999999999999999e-64  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2000  Undecaprenyl-phosphate galactose phosphotransferase  60.62 
 
 
215 aa  243  1.9999999999999999e-63  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.731568 
 
 
-
 
NC_012560  Avin_30050  sugar transferase family protein  73.21 
 
 
198 aa  241  3.9999999999999997e-63  Azotobacter vinelandii DJ  Bacteria  normal  0.0103418  n/a   
 
 
-
 
NC_013440  Hoch_5256  Undecaprenyl-phosphate galactose phosphotransferase  61.73 
 
 
204 aa  240  7.999999999999999e-63  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_2648  undecaprenyl-phosphate galactosephosphotransferase  58.76 
 
 
200 aa  240  9e-63  Shewanella denitrificans OS217  Bacteria  normal  0.679598  n/a   
 
 
-
 
NC_008009  Acid345_3821  undecaprenyl-phosphate galactosephosphotransferase  59.28 
 
 
206 aa  239  2e-62  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.529495 
 
 
-
 
NC_013522  Taci_0038  Undecaprenyl-phosphate galactose phosphotransferase  64.92 
 
 
210 aa  238  2.9999999999999997e-62  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_1664  undecaprenyl-phosphate galactose phosphotransferase  60.2 
 
 
199 aa  238  4e-62  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_011060  Ppha_0574  Undecaprenyl-phosphate galactose phosphotransferase  59.49 
 
 
200 aa  238  4e-62  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.2884  n/a   
 
 
-
 
NC_009715  CCV52592_1211  putative sugar transferase  58.38 
 
 
201 aa  237  5.999999999999999e-62  Campylobacter curvus 525.92  Bacteria  normal  n/a   
 
 
-
 
NC_009802  CCC13826_0450  Cpp29  56.35 
 
 
201 aa  231  5e-60  Campylobacter concisus 13826  Bacteria  normal  n/a   
 
 
-
 
NC_008787  CJJ81176_1141  general glycosylation pathway protein  55.61 
 
 
200 aa  226  1e-58  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  0.987369  n/a   
 
 
-
 
NC_003912  CJE1266  general glycosylation pathway protein  54.59 
 
 
200 aa  224  6e-58  Campylobacter jejuni RM1221  Bacteria  normal  n/a   
 
 
-
 
NC_009707  JJD26997_0597  general glycosylation pathway protein  54.59 
 
 
200 aa  221  4e-57  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  0.392245  n/a   
 
 
-
 
NC_013162  Coch_0716  sugar transferase  55.9 
 
 
207 aa  219  1.9999999999999999e-56  Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
NC_012039  Cla_1255  galactosyltransferase  56.32 
 
 
200 aa  219  1.9999999999999999e-56  Campylobacter lari RM2100  Bacteria  normal  n/a   
 
 
-
 
NC_008599  CFF8240_1381  general glycosylation pathway protein  53.3 
 
 
201 aa  215  4e-55  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  n/a   
 
 
-
 
NC_009714  CHAB381_0952  general glycosylation pathway protein  53.3 
 
 
201 aa  213  9.999999999999999e-55  Campylobacter hominis ATCC BAA-381  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_2523  Undecaprenyl-phosphate galactose phosphotransferase  53.85 
 
 
226 aa  210  1e-53  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  hitchhiker  0.00181679 
 
 
-
 
NC_003909  BCE_5393  UDP-galactose phosphate transferase  52.13 
 
 
230 aa  209  2e-53  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_014230  CA2559_10743  putative undecaprenyl-phosphate glycosyl-1-phosphate transferase  53.06 
 
 
202 aa  209  2e-53  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.335264  n/a   
 
 
-
 
NC_009767  Rcas_0494  undecaprenyl-phosphate galactose phosphotransferase  54.4 
 
 
219 aa  208  3e-53  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.664632  normal 
 
 
-
 
NC_013235  Namu_5254  Undecaprenyl-phosphate galactose phosphotransferase  51.55 
 
 
207 aa  206  2e-52  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_007498  Pcar_1529  putative YVfC-like sugar transferase  58.47 
 
 
226 aa  205  3e-52  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_3047  sugar transferase  50.52 
 
 
243 aa  202  3e-51  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_2344  undecaprenyl-phosphate galactose phosphotransferase  57.69 
 
 
232 aa  200  9.999999999999999e-51  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_3644  undecaprenyl-phosphate galactose phosphotransferase  50.78 
 
 
217 aa  198  3.9999999999999996e-50  Roseiflexus sp. RS-1  Bacteria  normal  0.212728  normal 
 
 
-
 
NC_014151  Cfla_0763  Undecaprenyl-phosphate galactose phosphotransferase  48.09 
 
 
219 aa  166  2e-40  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_008255  CHU_1211  sugar transferase; UDP-glucose lipid carrier transferase  44.79 
 
 
199 aa  165  5e-40  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.343253  normal 
 
 
-
 
NC_007498  Pcar_1519  sugar transferase  46.52 
 
 
214 aa  164  1.0000000000000001e-39  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_3631  sugar transferase  44.32 
 
 
190 aa  154  1e-36  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.666703 
 
 
-
 
NC_013216  Dtox_2852  Undecaprenyl-phosphate galactose phosphotransferase  45.16 
 
 
208 aa  152  4e-36  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_009620  Smed_4579  sugar transferase  46.74 
 
 
226 aa  151  5.9999999999999996e-36  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_4755  undecaprenyl-phosphate galactose phosphotransferase  46.43 
 
 
496 aa  150  1e-35  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.236094  normal 
 
 
-
 
NC_014151  Cfla_0885  exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase  47.67 
 
 
509 aa  150  1e-35  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal  0.532275 
 
 
-
 
NC_013595  Sros_0630  Undecaprenyl-phosphate galactose phosphotransferase  47.92 
 
 
484 aa  150  1e-35  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_014148  Plim_0633  Undecaprenyl-phosphate galactose phosphotransferase  46.03 
 
 
196 aa  149  2e-35  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.339085  n/a   
 
 
-
 
NC_013235  Namu_4441  exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase  45.69 
 
 
594 aa  150  2e-35  Nakamurella multipartita DSM 44233  Bacteria  normal  0.796924  normal  0.559619 
 
 
-
 
NC_011830  Dhaf_4475  Undecaprenyl-phosphate glucose phosphotransferase  45.56 
 
 
463 aa  149  4e-35  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_011666  Msil_3537  exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase  43.62 
 
 
488 aa  147  7e-35  Methylocella silvestris BL2  Bacteria  n/a    normal  0.0569176 
 
 
-
 
NC_010001  Cphy_3542  undecaprenyl-phosphate glucose phosphotransferase  40.33 
 
 
473 aa  147  1.0000000000000001e-34  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_1337  sugar transferase  43.78 
 
 
186 aa  146  2.0000000000000003e-34  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.0288404 
 
 
-
 
NC_008541  Arth_4061  undecaprenyl-phosphate galactose phosphotransferase  44.02 
 
 
522 aa  146  2.0000000000000003e-34  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013170  Ccur_08350  glycosyl transferase possibly involved in lipopolysaccharide synthesis  39.69 
 
 
201 aa  145  3e-34  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.163172  normal  0.229141 
 
 
-
 
NC_010511  M446_4990  undecaprenyl-phosphate glucose phosphotransferase  42.41 
 
 
491 aa  145  3e-34  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_010655  Amuc_2080  sugar transferase  48.03 
 
 
282 aa  145  5e-34  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  normal  0.262158 
 
 
-
 
NC_007298  Daro_1277  sugar transferase  42.16 
 
 
186 aa  144  1e-33  Dechloromonas aromatica RCB  Bacteria  normal  0.0679585  normal 
 
 
-
 
NC_013757  Gobs_0418  exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase  43.39 
 
 
495 aa  143  1e-33  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A3102  sugar transferase  40.91 
 
 
483 aa  142  2e-33  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_1068  putative glycosyl transferase  43.39 
 
 
494 aa  142  2e-33  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.676615  normal 
 
 
-
 
NC_007963  Csal_1693  undecaprenyl-phosphate galactosephosphotransferase  41.62 
 
 
346 aa  143  2e-33  Chromohalobacter salexigens DSM 3043  Bacteria  unclonable  0.0000000262579  n/a   
 
 
-
 
NC_012918  GM21_2587  sugar transferase  44.86 
 
 
186 aa  142  3e-33  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_008146  Mmcs_1295  undecaprenyl-phosphate galactosephosphotransferase  43.81 
 
 
496 aa  142  3e-33  Mycobacterium sp. MCS  Bacteria  normal  0.222797  n/a   
 
 
-
 
NC_008261  CPF_0595  sugar transferase family protein  39.38 
 
 
220 aa  142  3e-33  Clostridium perfringens ATCC 13124  Bacteria  normal  0.750917  n/a   
 
 
-
 
NC_009077  Mjls_1331  undecaprenyl-phosphate galactose phosphotransferase  43.81 
 
 
496 aa  142  3e-33  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_012034  Athe_0062  Undecaprenyl-phosphate glucose phosphotransferase  43.09 
 
 
457 aa  142  3e-33  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_1312  undecaprenyl-phosphate galactose phosphotransferase  43.81 
 
 
496 aa  142  3e-33  Mycobacterium sp. KMS  Bacteria  normal  0.454785  normal  0.17822 
 
 
-
 
NC_008726  Mvan_1703  undecaprenyl-phosphate galactose phosphotransferase  43.81 
 
 
496 aa  142  3e-33  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_16230  undecaprenyl-phosphate galactosephosphotransferase  40 
 
 
459 aa  142  4e-33  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_0462  exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase  43.09 
 
 
448 aa  142  5e-33  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.00445069  n/a   
 
 
-
 
NC_008530  LGAS_1153  lipopolysaccharide synthesis sugar transferase  43.92 
 
 
219 aa  142  5e-33  Lactobacillus gasseri ATCC 33323  Bacteria  hitchhiker  0.000000000000801839  hitchhiker  0.000000000000434208 
 
 
-
 
NC_010505  Mrad2831_3127  exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase  42.7 
 
 
501 aa  141  6e-33  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.526829  normal 
 
 
-
 
NC_010086  Bmul_4919  undecaprenyl-phosphate glucose phosphotransferase  41.3 
 
 
477 aa  141  8e-33  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.207968  hitchhiker  0.00190784 
 
 
-
 
NC_010730  SYO3AOP1_1395  exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase  41.92 
 
 
470 aa  140  8e-33  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  decreased coverage  0.000000000275666  n/a   
 
 
-
 
NC_010320  Teth514_2276  undecaprenyl-phosphate galactose phosphotransferase  42.93 
 
 
456 aa  141  8e-33  Thermoanaerobacter sp. X514  Bacteria  unclonable  0.0000000104182  n/a   
 
 
-
 
NC_008578  Acel_1939  undecaprenyl-phosphate galactose phosphotransferase  41.84 
 
 
496 aa  141  8e-33  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_3388  sugar transferase  43.78 
 
 
186 aa  141  8e-33  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_0461  undecaprenyl-phosphate galactose phosphotransferase  40.54 
 
 
466 aa  141  8e-33  Psychromonas ingrahamii 37  Bacteria  normal  0.323165  normal  0.0827717 
 
 
-
 
NC_009632  SaurJH1_0152  sugar transferase  39.89 
 
 
185 aa  140  9.999999999999999e-33  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_0147  sugar transferase  39.89 
 
 
185 aa  140  9.999999999999999e-33  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A3721  sugar transferase  43.78 
 
 
362 aa  139  1.9999999999999998e-32  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.243024  n/a   
 
 
-
 
NC_013457  VEA_001326  Capsular polysaccharide synthesis enzyme CpsA sugar transferase  41.45 
 
 
466 aa  139  1.9999999999999998e-32  Vibrio sp. Ex25  Bacteria  normal  0.183257  n/a   
 
 
-
 
NC_010581  Bind_1034  undecaprenyl-phosphate glucose phosphotransferase  43.39 
 
 
490 aa  140  1.9999999999999998e-32  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_008532  STER_1067  lipopolysaccharide synthesis sugar transferase  41.45 
 
 
455 aa  139  1.9999999999999998e-32  Streptococcus thermophilus LMD-9  Bacteria  normal  0.20867  n/a   
 
 
-
 
NC_007413  Ava_2099  sugar transferase  40.96 
 
 
252 aa  139  3e-32  Anabaena variabilis ATCC 29413  Bacteria  normal  0.672919  hitchhiker  0.000893553 
 
 
-
 
NC_009675  Anae109_2622  undecaprenyl-phosphate galactose phosphotransferase  48.5 
 
 
215 aa  139  3e-32  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_011060  Ppha_0569  sugar transferase  42.16 
 
 
186 aa  139  3e-32  Pelodictyon phaeoclathratiforme BU-1  Bacteria  hitchhiker  0.00336814  n/a   
 
 
-
 
NC_011894  Mnod_2163  exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase  42.08 
 
 
498 aa  138  4.999999999999999e-32  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_1057  undecaprenyl-phosphate glucose phosphotransferase  41.3 
 
 
465 aa  138  4.999999999999999e-32  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_009718  Fnod_1436  sugar transferase  43.09 
 
 
329 aa  138  6e-32  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  0.0467092  n/a   
 
 
-
 
NC_013204  Elen_2023  Undecaprenyl-phosphate galactose phosphotransferase  40.41 
 
 
201 aa  137  7e-32  Eggerthella lenta DSM 2243  Bacteria  normal  0.686933  hitchhiker  0.0000000000460797 
 
 
-
 
NC_009654  Mmwyl1_0842  undecaprenyl-phosphate galactose phosphotransferase  42.59 
 
 
471 aa  137  7.999999999999999e-32  Marinomonas sp. MWYL1  Bacteria  normal  0.390574  normal 
 
 
-
 
NC_014158  Tpau_0052  exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase  39.06 
 
 
532 aa  137  8.999999999999999e-32  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.444086  n/a   
 
 
-
 
NC_008639  Cpha266_2615  sugar transferase  41.62 
 
 
188 aa  137  8.999999999999999e-32  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>