Gene Avin_16230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_16230 
Symbol 
ID7760558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1601657 
End bp1603036 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content60% 
IMG OID643804523 
Productundecaprenyl-phosphate galactosephosphotransferase 
Protein accessionYP_002798813 
Protein GI226943740 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2148] Sugar transferases involved in lipopolysaccharide synthesis 
TIGRFAM ID[TIGR03023] Undecaprenyl-phosphate glucose phosphotransferase
[TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATTCCCC GTTTTCAGCC GACTTTCGCC GAGCGCTACC CCGTCCCTCT GTTCGTGGCG 
CTGTTGGACC TGTTTTTTGT CATTGCTGCA GCCCTCCTGG CCCATCAGTT TCGTTTCGAT
AATTTCGACA TGTCGGGGCG TTACAACACC GCGACATTGC TGAGCGCGAT CGTTGTCGTT
TTTTGCCTGG CGCTGGCCGG GGTTTACGGT TCGCAACGTG GTCGACCCTT CCAGCGCCAA
TTCAGTGTGC TGACCTTTGC CTGGCTCGTC GCGGCAGGCA TATTGCTTTC GCTTTCCTTC
CTGCTCAAGG TGTCGGAAAG CTACTCACGG CTCTGGTTCG TGAGCATGCT GTTGCTGGGG
TGGTCCCTGA GCCTGCTGTT GCGTTTGGTG GCCTTCCTGC TGCTACGCCA CCTGCGTGCC
CTGGGGCGAA ACCTGAAAAC CGTACTCCTG GTGGATTCGG GAGGCAGTTC CGCCGGCCAA
CTGAGCGATG GGCGCGCGCT CGAGGAGCAT GGTTTCAGGG TGGTTCACAG CCTGCCATTC
AGTCGCGACC CGGACTGGCT GGATACCTTG GTCGCCGGGG TCAGGCAACA TGGTGTGCAT
GAGGTATGGC TCTGTCTTCC TCTCGGCGAG GGGGGAGCCA TCCGCTCGAT TCTCTACGCA
TTGCGTCACC ATACGGTAGA GATACGTTTC ATTCCCGAAT GGGACGATAT CCGCCTGTTC
AATCACCGCA TCAGTCATAT CGCCGGCCTC TATACCCTGG ACCTGAGCTT CAGCCCGATG
AACGGTCCGG CGCGACTGAT CAAGCGGCTG GAGGATCTGC TGATCGCCAT TCCCGTCATG
GTATTGATCC TGCCTCTCTG TCTCCTGATC GGCCTGGCCG TCAAGCTCAC CTCTCGGGGG
CCTATGCTGT TCAAGCAGTA CCGCACCGGC ATCAACGGCA AGCGCTTCAA GGTCTACAAG
TTCCGCTCGA TGGTGGTGCA CCGGGAGAAG GACGGCGAGG TGACCCAGGC CTGCCGTAAC
GATGCGCGCG TCACGCTCCT GGGAGCCTTC CTGCGGCGCA CCAGCCTCGA CGAACTGCCG
CAGTTCTTCA ACGTGCTGCA GGGGCGCATG TCCATCGTCG GTCCGCGTCC CCATGCCCTG
GAGCACAACG AGTACTACAA GGATCTGGTC GAGTCCTACA TGCAGCGCCA CAAGGTCAAG
CCGGGCATCA CCGGCTGGGC GCAAGTCTGT GGCTACCGGG GCGAGACGGA TACCTTGGAG
AAGATGCAGA AGCGGGTGGA GTACGACCTC TGGTACATCG ACAACTGGTC GTTGTGGCTG
GACCTGAAGA TCATCTTCCT GACGGTGTTC AAGGGGTTCG TCGGCAAGAA TGCCTATTGA
 
Protein sequence
MIPRFQPTFA ERYPVPLFVA LLDLFFVIAA ALLAHQFRFD NFDMSGRYNT ATLLSAIVVV 
FCLALAGVYG SQRGRPFQRQ FSVLTFAWLV AAGILLSLSF LLKVSESYSR LWFVSMLLLG
WSLSLLLRLV AFLLLRHLRA LGRNLKTVLL VDSGGSSAGQ LSDGRALEEH GFRVVHSLPF
SRDPDWLDTL VAGVRQHGVH EVWLCLPLGE GGAIRSILYA LRHHTVEIRF IPEWDDIRLF
NHRISHIAGL YTLDLSFSPM NGPARLIKRL EDLLIAIPVM VLILPLCLLI GLAVKLTSRG
PMLFKQYRTG INGKRFKVYK FRSMVVHREK DGEVTQACRN DARVTLLGAF LRRTSLDELP
QFFNVLQGRM SIVGPRPHAL EHNEYYKDLV ESYMQRHKVK PGITGWAQVC GYRGETDTLE
KMQKRVEYDL WYIDNWSLWL DLKIIFLTVF KGFVGKNAY