Gene Pcar_1529 details

Gene Information

• Locus tag: Pcar_1529
• ID: 3724228
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter carbinolicus DSM 2380
• Kingdom: Bacteria
• Replicon accession: NC_007498
• Strand: +
• Start bp: 1792914
• End bp: 1793594
• Gene Length: 681 bp
• Protein Length: 226 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 637751125
• Product: putative YVfC-like sugar transferase
• Protein accession: YP_356945
• Protein GI: 77919130
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG2148] Sugar transferases involved in lipopolysaccharide synthesis

Plasmid Coverage information

• Num covering plasmid clones: 84
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAACTGC AGCCTGATAT GTTCTTGAAG CGTTGTCTCG ATCTGTTTTT TGCGGCGACC 
CTGTTACTGC TGTTGTTGCC GCTGTTGTCG GGGGTGTGGT TGCTGGTGCG CTGGAAATTG 
GGTAAACCCG TTTTTTTTCG ACAGGTACGA CCGGGGCTGA ATGAGCGTCC CTTCACTTTG 
TACAAATTCC GCACCATGAG CATGGATCGG GACAATGACG GCAATCTGCT GCCCGACGGG 
GCGCGCCTGA CTTCCCTGGG GCGCATTCTG CGCAATACCA GTCTGGATGA ATTGCCCGAG 
TTGTTCAATG TTCTAAAGGG GGATATGAGC CTGGTCGGAC CTCGGCCTTT GTATAGCAAG 
TATCTGCCCT GGTACAGTCA GCGCGAACGC CTGAGACATA CGATAAAACC GGGAATTACC 
GGCTGGGCCC AGATTAACGG ACGTAACAGG TTGCCATGGG ATCAGCGGCT GGCAATGGAT 
GTCTGGTATG TCGAAAACCG GTCCTTGCTT CTGGATGGTA AGATTTTATT GAAGACCGTC 
TCGTTTGTCC TGAACCGCCA TGGAGTATCT GCCGATCCGG ATCTGGTGGA AAACGATCTG 
GATATCGAAC GGTGCGAGCT TTCAACGGAC GGAACATATC GTGGAAATAT GATTCCCAGA 
GGAAATCATG ACGAAGCGTA A 

 

Protein sequence

MELQPDMFLK RCLDLFFAAT LLLLLLPLLS GVWLLVRWKL GKPVFFRQVR PGLNERPFTL 
YKFRTMSMDR DNDGNLLPDG ARLTSLGRIL RNTSLDELPE LFNVLKGDMS LVGPRPLYSK 
YLPWYSQRER LRHTIKPGIT GWAQINGRNR LPWDQRLAMD VWYVENRSLL LDGKILLKTV 
SFVLNRHGVS ADPDLVENDL DIERCELSTD GTYRGNMIPR GNHDEA