| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_0362 |
|---|
| Symbol | |
|---|
| ID | 3756333 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | - |
|---|
| Start bp | 352100 |
|---|
| End bp | 353896 |
|---|
| Gene Length | 1797 bp |
|---|
| Protein Length | 598 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637781222 |
|---|
| Product | lipopolysaccharide synthesis sugar transferase |
|---|
| Protein accession | YP_386858 |
|---|
| Protein GI | 78355409 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase
[COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGAACCA AAATCCTTCT GGCGGGCAAC TATGCTCCCG CCCTGCTGCT CTTCAGGGGC
GAATTCATCC GTGATCTGGT GCGCGCCGGT CACGAAGTGG TGTGCACCGC GCCGGAAGAC
GACGAAAAAA CCCGCGACGC ACTGGCACAG ATGGGGGTGC GTTACCGGAC GGTTCCGCTG
AAGCGCACCG GTATGAACCC GCTGCGCGAC TGCATCACAT TCCTTTGCTA TCTGTGGACT
TTTCTTGAAG AACGTCCCGA TGTGGTGCTC ACCAGCTCCA TCAAGCCGGT CATCTACGGC
GGACTGGCGG CGTGGCTTGC CCGCGTGCCC CGCCGTTTCG GCATGATCAC CGGACTGGGG
TACGCATTTT CGCACAGGCA GGGCCTGCGG GGACTGCTCA ACAGGCTTGT CAGGGGGCTT
TATGCTCTTG TCATGCCCCG GTATCAGGCC GTTTTTTTTC TTAATCCGGA CGACAAAGCC
CTGTTCGACG CTGAAAAGCT GACCCGCAGC ACCACGGCCG TGGTGCTGAA CGGTGAAGGC
GTGAACCTTG ACCATTATGC CTGCCGCCCG CCGCAGCAGG ACCCTGTGGA ATTCCTGCTG
GTGGCGCGGC TGCTCAGGGC CAAGGGCGTG CCGGAATTCT GCGAGGCCGC ACTGATGCTC
GCCCCGCGTT ATCCTCAGGC ACGGTTCCGC CTTGTGGGCT GGCACGACAA AGGGCCCGAT
TCCGTCTCGG AGGCTGATAT CGCCCGCTGG ACGGCAGGCG GCGTGCAGTA TGACGGCCCC
GCGGACGATG TGCGCCCCGC GCTGCACAGC GCCTCGGTGT ATGTGCTGCC CTCTCACCGC
GAAGGCACTC CGCGCTCCAC CATGGAAGCC ATGAGCACCG GCCGTCCTGT CATCACCACA
GATGCACCCG GCTGCCGTGA GACCGTAAAA CACGGCGAAA ACGGCTTTCT GGTACCCGCA
GGTGACACTG CGGCACTGGC TGCCGCCATG GAAAAATTTA TCACACAGCC GCAGCTCATC
GCGCCCATGG GCGCCCGCAG CCGCGCCATG GCCGAAGAAC GGTACGACGT ACGCGAAGTG
AACCGCATCA TATTCCGTAC CATGCGCCTG CCCGAAGCAG CCAACGGCCC CCGCCCGCGC
AGGGTGACGC CTCCCGCGCT CAAACGGGCC TTTGATCTCG GGCTGGCTGT CCCCGCTTTC
ATCCTGCTGC TGCCGGTCAT GGCCGCCGTT GCGGTTGCCG TGCGGCGCAA GCTGTCCAGA
GACGTGTTCT TCCGGCAGAT ACGCCCCGGT AAAAACGGCA GGCCCTTCAC CATCATCAAA
TTCCGCACCA TGACCGATGC GCGAGACTCC CGCGGCAACC TGCTGCCCGA CGGCGAACGC
CTGACAGACT TCGGCCGGTT TCTGCGCGCA AGCTCGCTTG ATGAACTGCC TGAGTTGTGG
AACGTGATAC GGGGCGACAT GAGTCTGGTC GGCCCGCGGC CGCTGCTGAT GCAGTATCTG
CCGCTGTACA CACCCAGACA GGCGTCACGC ATGGATGTAC TGCCCGGCAT AACCGGCTGG
GCGCAGGTCA ACGGCCGCAA TGCCGTGGAC TGGGACGACA AGCTGGAAAT GGATGCATGG
TATGTGGACA ACCACACGCT CTGCCTTGAC ATCCGCATCA TCTTAATGAC CGTCATAAAA
GTCTTCCGCC GTGAAGGTGT GGCCAAACAG GGGCACGCCA CCACGGATAC ATTCACCGGC
AGTGCACGGC ACGATGACGG ACGCTCTGCC AGATACGGCC GCAACCATGA ACAGTAA
|
|---|
| Protein sequence | MRTKILLAGN YAPALLLFRG EFIRDLVRAG HEVVCTAPED DEKTRDALAQ MGVRYRTVPL
KRTGMNPLRD CITFLCYLWT FLEERPDVVL TSSIKPVIYG GLAAWLARVP RRFGMITGLG
YAFSHRQGLR GLLNRLVRGL YALVMPRYQA VFFLNPDDKA LFDAEKLTRS TTAVVLNGEG
VNLDHYACRP PQQDPVEFLL VARLLRAKGV PEFCEAALML APRYPQARFR LVGWHDKGPD
SVSEADIARW TAGGVQYDGP ADDVRPALHS ASVYVLPSHR EGTPRSTMEA MSTGRPVITT
DAPGCRETVK HGENGFLVPA GDTAALAAAM EKFITQPQLI APMGARSRAM AEERYDVREV
NRIIFRTMRL PEAANGPRPR RVTPPALKRA FDLGLAVPAF ILLLPVMAAV AVAVRRKLSR
DVFFRQIRPG KNGRPFTIIK FRTMTDARDS RGNLLPDGER LTDFGRFLRA SSLDELPELW
NVIRGDMSLV GPRPLLMQYL PLYTPRQASR MDVLPGITGW AQVNGRNAVD WDDKLEMDAW
YVDNHTLCLD IRIILMTVIK VFRREGVAKQ GHATTDTFTG SARHDDGRSA RYGRNHEQ
|
|---|
| |