Gene Dfer_3631 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3631 
Symbol 
ID8227216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4425357 
End bp4425929 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content51% 
IMG OID644931463 
Productsugar transferase 
Protein accessionYP_003088001 
Protein GI255037380 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2148] Sugar transferases involved in lipopolysaccharide synthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.666703 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCGTT CAAAAGGAAA AAGAATTTTA GACATTCTCA TGGCGGCAAC GGGGCTCATT 
ACCTCGTTGC CGTTTTTTGT GCTGCTACCG CCGGTTTTGT GGGTGTATTT CAAATGCAAT
CCGTTTTTTA CGCAGCAGCG GCCGGGGCAC TATGGGCGGC TATTCACTAT TCTCAAATTC
AGGACGATGT TTCCCGACGG ACGTCCGGTT TGCAGGTTTG GGAAATTGCT CCGCAAAACT
TCGCTGGATG AATTGCCGCA GTTCTGGAAC GTGCTGCGTG GCGAAATGAG CATCGTCGGG
CCGCGGCCGT TGCTGGCGGA CTACCTGGCT CTTTATAACT CACACCAGCA TTTGCGCCAC
AATGTAAAAC CCGGTATAAC CGGGCTGGCA CAAATCAGCG GCGGCAACGG GCTCAGCTGG
AACGAAAAGT TTGACTATGA CCGATATTAT GTCGAAAGCC ATTCCCTGTC GCTCGACTGC
CGGATCATTT TTACGACGTT CAGCAAAGCA TTCTCCCTCC GAAAAACCGA CGGGACCGAA
GTTTCACCAT TCAATGGCAA TGCCGTATGC TGA
 
Protein sequence
MYRSKGKRIL DILMAATGLI TSLPFFVLLP PVLWVYFKCN PFFTQQRPGH YGRLFTILKF 
RTMFPDGRPV CRFGKLLRKT SLDELPQFWN VLRGEMSIVG PRPLLADYLA LYNSHQHLRH
NVKPGITGLA QISGGNGLSW NEKFDYDRYY VESHSLSLDC RIIFTTFSKA FSLRKTDGTE
VSPFNGNAVC