| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_2587 |
|---|
| Symbol | |
|---|
| ID | 8137929 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | - |
|---|
| Start bp | 3018780 |
|---|
| End bp | 3019340 |
|---|
| Gene Length | 561 bp |
|---|
| Protein Length | 186 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 644870195 |
|---|
| Product | sugar transferase |
|---|
| Protein accession | YP_003022385 |
|---|
| Protein GI | 253701196 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 143 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAGAT TTGTTGATTG GATGCTTTCT GTGGTGCTGC TCGCTTTATG CAGCGTCCCC
ATGCTGCTCG TGGGTTTATT GGTAAAGCTT ACCTCCCCGG GGCCCGTGCT GTACTGGTCC
GACAGGGTCG GCGTGAACAA TACCATCTTC CGGATGCCGA AGTTTCGCAC TATGCTGATA
GACACTCCCG CTGTCGCTAC CCACCTTCTC ACTGATCCCG ATCGATTCCT AACCCCCATT
GGGAAATTCC TGAGAAAATC AAGTCTCGAC GAGTTGCCGC AGCTGTTCAG CATCCTGCGT
GGCGACATGA GTTTCGTCGG CCCTCGTCCC GCCCTTTATA ACCAGGATGA CCTGATTAAG
TTGCGAACGG AGAAAGGCGT TCATGTTCTG CCTCCTGGAC TGACGGGGTG GGCGCAGATA
AATGGCCGCG ACGAGCTTCC CATACCCGTC AAGGTCGACT TCGACGAGCA TTACCTCAAG
AACCGGTCTA TGGCGCTGGA CATCCGCATT ATCTTCCTCA CGGCGTTAAA AGTACTGAAG
AGTGACGGTG TCTCTCACTG A
|
|---|
| Protein sequence | MKRFVDWMLS VVLLALCSVP MLLVGLLVKL TSPGPVLYWS DRVGVNNTIF RMPKFRTMLI
DTPAVATHLL TDPDRFLTPI GKFLRKSSLD ELPQLFSILR GDMSFVGPRP ALYNQDDLIK
LRTEKGVHVL PPGLTGWAQI NGRDELPIPV KVDFDEHYLK NRSMALDIRI IFLTALKVLK
SDGVSH
|
|---|
| |