Gene Rcas_0494 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0494 
Symbol 
ID5537957 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp635852 
End bp636511 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content59% 
IMG OID640892656 
Productundecaprenyl-phosphate galactose phosphotransferase 
Protein accessionYP_001430642 
Protein GI156740513 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2148] Sugar transferases involved in lipopolysaccharide synthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.664632 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCGCA GATACGGCAA ACGCGCACTT GACCTGATTC TGGTTGTTCC GGCGCTGATC 
CTGCTGGCGC CGGCAATGGC AATCCTTACC CTCTTGATTC GGCTCAAGAT GGGATCGCCG
GTGCTATTCA CCCAGGAGCG CGCCGGAAAA GATGGGACAC CGTTCAGGCT CTACAAATTT
CGCAGCATGA CCAATGCGCG CGACGCACAG GGCAACCTGT TGCCCGACGA GCAACGTCTG
ACGCCATTCG GCAGATTCCT GCGCAGCGCC AGTCTAGACG AACTGCCGCA GTTATTCAAC
GTCCTGCGTG GTGAGATGAG CCTGGTGGGA CCGCGACCGT TGTTGATGAC ATACATCAAC
CGGTATACGC CAGAGCAACG CCGACGGCTT GATGTGCTGC CCGGCGTGAC CTGCCAGGCG
GTGCTCCACG GGCGCAGCAA TCAGACGTGG GACGAAATCC TGGCGCGTGA TGTCTGGTAT
GTCGATCATA TCAGCCTCTG GACCGATCTC CGTATTCTGT TCGGCACGAT GCGCGTGGTG
CTGACACGCG AGGGGGTCGA GCGCAGCGCC AATGGTCAGG TTCCCGAATT TCTTGGCGTG
CTGGCGCAAG CACAGGGAAA CGTTTCCGAA ACCCATGTCG GGCAATCACA GGGATGGTGA
 
Protein sequence
MYRRYGKRAL DLILVVPALI LLAPAMAILT LLIRLKMGSP VLFTQERAGK DGTPFRLYKF 
RSMTNARDAQ GNLLPDEQRL TPFGRFLRSA SLDELPQLFN VLRGEMSLVG PRPLLMTYIN
RYTPEQRRRL DVLPGVTCQA VLHGRSNQTW DEILARDVWY VDHISLWTDL RILFGTMRVV
LTREGVERSA NGQVPEFLGV LAQAQGNVSE THVGQSQGW