Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0494 |
Symbol | |
ID | 5537957 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 635852 |
End bp | 636511 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640892656 |
Product | undecaprenyl-phosphate galactose phosphotransferase |
Protein accession | YP_001430642 |
Protein GI | 156740513 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.664632 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTATCGCA GATACGGCAA ACGCGCACTT GACCTGATTC TGGTTGTTCC GGCGCTGATC CTGCTGGCGC CGGCAATGGC AATCCTTACC CTCTTGATTC GGCTCAAGAT GGGATCGCCG GTGCTATTCA CCCAGGAGCG CGCCGGAAAA GATGGGACAC CGTTCAGGCT CTACAAATTT CGCAGCATGA CCAATGCGCG CGACGCACAG GGCAACCTGT TGCCCGACGA GCAACGTCTG ACGCCATTCG GCAGATTCCT GCGCAGCGCC AGTCTAGACG AACTGCCGCA GTTATTCAAC GTCCTGCGTG GTGAGATGAG CCTGGTGGGA CCGCGACCGT TGTTGATGAC ATACATCAAC CGGTATACGC CAGAGCAACG CCGACGGCTT GATGTGCTGC CCGGCGTGAC CTGCCAGGCG GTGCTCCACG GGCGCAGCAA TCAGACGTGG GACGAAATCC TGGCGCGTGA TGTCTGGTAT GTCGATCATA TCAGCCTCTG GACCGATCTC CGTATTCTGT TCGGCACGAT GCGCGTGGTG CTGACACGCG AGGGGGTCGA GCGCAGCGCC AATGGTCAGG TTCCCGAATT TCTTGGCGTG CTGGCGCAAG CACAGGGAAA CGTTTCCGAA ACCCATGTCG GGCAATCACA GGGATGGTGA
|
Protein sequence | MYRRYGKRAL DLILVVPALI LLAPAMAILT LLIRLKMGSP VLFTQERAGK DGTPFRLYKF RSMTNARDAQ GNLLPDEQRL TPFGRFLRSA SLDELPQLFN VLRGEMSLVG PRPLLMTYIN RYTPEQRRRL DVLPGVTCQA VLHGRSNQTW DEILARDVWY VDHISLWTDL RILFGTMRVV LTREGVERSA NGQVPEFLGV LAQAQGNVSE THVGQSQGW
|
| |