Gene Pcar_1519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1519 
Symbol 
ID3724218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand+ 
Start bp1781192 
End bp1781836 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content44% 
IMG OID637751115 
Productsugar transferase 
Protein accessionYP_356935 
Protein GI77919120 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2148] Sugar transferases involved in lipopolysaccharide synthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones60 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTATCC ATTCCAGAGA TGGTAGATCC AATATGGTTA GAAACCGCAT CCAATATTCG 
ATCAAAAGGA TCTGCGACAG GATTCTTGCC GTTTTCATGC TCGTTGTTTT AAGTCCTGTT 
TTTCTCATTC TTTCCATTGT CATTAAGGCT GACAACAATG GCCCGGTTCT GTTTAGGCAA 
AAACGCCTCG GGTATCGCGG AAAGATTTTT TTCATCTATA AGTTCCGGAC GATGGTACCT 
GGGGCAATCG ATCTCAGAAA CCCTGACGGC AGTACCTATA ATGCCGCGGA CGATACGAGG 
GTAACGAGGA TAGGGAAGAT TCTTCGAACC TCCAGCCTGG ACGAGTTGCC CCAGCTTTTC 
AATATTTTAA AAGGGGACAT GAGCTTCATC GGACCCCGCC CGGATCTGCC TGAATTCTAC 
GAGAAATATA CATCGCGTCA AAAACATAAA GTAGATGTCT TGCCCGGGGT AACCGGCCTG 
GCGCAAATCA GTGGAAGAAA TGAAATCTCT CATGCTGAAA GGATTGAACA TGACCTGATT 
TATATAGAGA GTTATTCTTT GCTTTTAGAC CTTAAAATCA TATTCAAAAC GGTTGTTAAT 
GTCATGTTTG CCAAAGGCTT ATACGTGAGG CAGGATAAAG ATTGA
 
Protein sequence
MGIHSRDGRS NMVRNRIQYS IKRICDRILA VFMLVVLSPV FLILSIVIKA DNNGPVLFRQ 
KRLGYRGKIF FIYKFRTMVP GAIDLRNPDG STYNAADDTR VTRIGKILRT SSLDELPQLF 
NILKGDMSFI GPRPDLPEFY EKYTSRQKHK VDVLPGVTGL AQISGRNEIS HAERIEHDLI 
YIESYSLLLD LKIIFKTVVN VMFAKGLYVR QDKD