Gene Coch_0716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0716 
Symbol 
ID8367133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand- 
Start bp872548 
End bp873171 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content43% 
IMG OID644983143 
Productsugar transferase 
Protein accessionYP_003140835 
Protein GI256819556 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2148] Sugar transferases involved in lipopolysaccharide synthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATAGGA ATATTATAAA ACCGGCGTTA GACTTTCTTA CAGCACTGAT TGCCTTTATT 
GTGCTGAGTC CTATCTTTGT GGTGGTGATG GTAGGGTTGT GGTTTGCTAA TAACGGAAAG 
CCGTTCTTCT ATCAGTTACG ACCTGGGAAA GGAGAACGCA TTTTTAGGAT TATCAAGTTC 
AAAACAATGA ATGACCGTTG TGATGCCAAC GGACAGCTTT TGCCTGATGC TAAGCGACTC 
ACGAAAATAG GAGCTTTTGT ACGGAAGACT TCGCTTGATG AGATACCACA GTTGCTGAAT 
GTATTGAAAG GGGATATGTC GGTTATAGGT CCGAGACCGT TATTACCTCA GTATTTACCT 
TTGTATAATG AGACTCAGAA GCGTAGGCAC GAGGTAAAAC CAGGTATCAC TGGTTGGGCG 
CAAGTGAATG GGCGCAATGC TATCAGCTGG GAAAAGAAAT TTGAGTTGGA CGTGTGGTAC 
GTAGACCACC AATCATTCGT ATTAGACCTT AAAATACTGT TTCTTACGGT GAAGAAAGTG 
TTTATACGCG AAGGGATATC ACAAGAAGGA CAAGCTACAA TGGAGGAGTT TAGAGGGGGT 
CGTAACACGA CAAGCAGTTT GTAG
 
Protein sequence
MYRNIIKPAL DFLTALIAFI VLSPIFVVVM VGLWFANNGK PFFYQLRPGK GERIFRIIKF 
KTMNDRCDAN GQLLPDAKRL TKIGAFVRKT SLDEIPQLLN VLKGDMSVIG PRPLLPQYLP 
LYNETQKRRH EVKPGITGWA QVNGRNAISW EKKFELDVWY VDHQSFVLDL KILFLTVKKV 
FIREGISQEG QATMEEFRGG RNTTSSL