Gene Hoch_5256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5256 
Symbol 
ID8547668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp7225918 
End bp7226532 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content72% 
IMG OID646389930 
ProductUndecaprenyl-phosphate galactose phosphotransferase 
Protein accessionYP_003269634 
Protein GI262198425 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2148] Sugar transferases involved in lipopolysaccharide synthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAACG CCGCGCTCAA ACGCCTGCTC GACCTCGGCC TGGCCAGCGC CGCGCTGGTG 
CTGGGCGCGC CGCTCATCGC CGGCGTGGCC GGGCTGGTGC GCGTGCGCCT GGGCGCGCCG
GTGCTGTTTC GCCAGGTGCG GCCCGGTCTC GGCGGCGGGC TGTTCACGAT GTACAAATTC
CGCACCATGC GCGACGCGCT CGACGCCGAC GGCGAGCCGC TGCCCGACGA GCAGCGGCTC
ACGGCCTTTG GCAAGCGGCT GCGCGAGAGC AGCCTCGACG AGCTGCCCGA GCTGTTCAAC
GTGCTGCGCG GCGATATGAG CCTGGTCGGC CCGCGGCCGC TGCTGGTCGA GTATCTGCCG
CGCTACAGCC GCGAGCAGGC GCGGCGCCAT CAGGTCAAAC CGGGCATCAC CGGCTGGGCG
CAGATCCACG GCCGCAACGC GCTCACCTGG GAGGAGAAGT TCGCGCTCGA CTGCTGGTAC
GTCGATCACC AGTCGCTGCT GCTCGACCTC TACATCCTGG CGCGCACCCT GGCCGTGGTG
GTCGGCCGGC GCGGCATCGA ACACGCCGGC AGCGCCACCA TGCCGGTATT CCAGGGCTCG
CCGCCGCCAT CCTGA
 
Protein sequence
MGNAALKRLL DLGLASAALV LGAPLIAGVA GLVRVRLGAP VLFRQVRPGL GGGLFTMYKF 
RTMRDALDAD GEPLPDEQRL TAFGKRLRES SLDELPELFN VLRGDMSLVG PRPLLVEYLP
RYSREQARRH QVKPGITGWA QIHGRNALTW EEKFALDCWY VDHQSLLLDL YILARTLAVV
VGRRGIEHAG SATMPVFQGS PPPS