Gene Cphy_3542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_3542 
Symbol 
ID5743654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp4372639 
End bp4374060 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content34% 
IMG OID641294653 
Productundecaprenyl-phosphate glucose phosphotransferase 
Protein accessionYP_001560630 
Protein GI160881662 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2148] Sugar transferases involved in lipopolysaccharide synthesis 
TIGRFAM ID[TIGR03023] Undecaprenyl-phosphate glucose phosphotransferase
[TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAAGG ATAATCAGAA AATATTAAAC CGTATTCATA TAATTATTGA TGGAATCTTA 
ATTATTTTGG CTTTTATATC AGCCTATTCT TTACGATTCC ATTTATTAAA AGGAATGCCT
TTCTTTGAGA TAGAGGATAG TGAAAAATTT TATGAGTTAT ATAAATTATT GCCCTATCTC
TATATCTTAG TTCCAGCATA TTTAATCATA TATTCCTCTT GTAATATGTA CAAGCCTCAA
CGAAGCAATA GCAAACGTAT TATGGTATGG AATTTAGTGA AGGCGAATTT CATTGGTATT
TTAGTATTTA TATCAATACT ATGGTTAACC AAGGAGTTGG ATGTATCTCG TAAATTCTCT
GCTACCTTTA TGACGGTAAG TGTTTTATAT GGAGCTTTAT TTCGTTTTAT CCTAGCGAAA
ATTCTTAGTG AAATGAGAAG GAAGGGATTT AATCAAAAGC ACGTACTTAT CGTTGGTTAT
AGCCGTGCTG CAGAAGGTTA TATTGATCGG CTTGCTGGAA ATCCGGATTG GGGTTACCAT
ATCTATGGTA TTCTTGACGA CATCATGGAG GTTGGTACTA CCTATAAAAA AGTGAAAGTA
ATAGGTACAA CCGATGAATT GCAGACAATC CTTGAGGAAA ATGATTTAGA TGAAATTGCA
GTAACTCTTA GTATTAATGA ATATGCAAAA TTAGAGTACT TAGTAGGAGT CTGTGAAAAA
GCTGGAGCTC ATACGAAATT TGTTCCTGAT TATCACAATA TTATTCCAAC AATACCTGTA
ATGGAAGATT TGGATGGTCT GCCAGTAATT AATATACGTA ATGTTCCTTT AAACAATTCA
TTTAATAGTA TTGTGAAAAG GTTGGTAGAT GTCTTTGGAG CCATTGTTGC TCTTATCTTG
TTCTCAATAC CAATGGCTAT TGTTGCTATT ATCATTAAGT GTACTTCCCC GGGCCCTCTT
ATCTATTCTC AAGTACGTGT AGGTCTTCAC AATAAGGAAT TTAAGATGTA CAAGTTCCGT
TCGATGGTCG TACAAACTGA AAAGAGTGAA AAGAAGGCAT GGACAACAGC AAATGATAAC
AGAGTGACTC CGATTGGTCG TTTTATTCGT AAAACTAGTA TTGATGAATT ACCTCAGCTT
TTTAACATCT TGTGTGGAGA TATGAGTTTG GTTGGTCCTA GACCAGAACG CCCTTACTTT
GTGGAGAAGT TTAAGGAGGA AATTCCTCGC TATATGATTA AACATCAGGT GCGCCCAGGC
CTTACCGGAT GGGCTCAGAT CAATGGATTT CGTGGAGATA CTTCAATTAG AAAACGTATT
GAATGTGATT TGTATTATAT AGAGAACTGG ACACTTGGTC TCGACTTTAA GATATTATTC
TTAACCATAT TTAAAGGATT TATTAATAAA AATGCCTATT AG
 
Protein sequence
MIKDNQKILN RIHIIIDGIL IILAFISAYS LRFHLLKGMP FFEIEDSEKF YELYKLLPYL 
YILVPAYLII YSSCNMYKPQ RSNSKRIMVW NLVKANFIGI LVFISILWLT KELDVSRKFS
ATFMTVSVLY GALFRFILAK ILSEMRRKGF NQKHVLIVGY SRAAEGYIDR LAGNPDWGYH
IYGILDDIME VGTTYKKVKV IGTTDELQTI LEENDLDEIA VTLSINEYAK LEYLVGVCEK
AGAHTKFVPD YHNIIPTIPV MEDLDGLPVI NIRNVPLNNS FNSIVKRLVD VFGAIVALIL
FSIPMAIVAI IIKCTSPGPL IYSQVRVGLH NKEFKMYKFR SMVVQTEKSE KKAWTTANDN
RVTPIGRFIR KTSIDELPQL FNILCGDMSL VGPRPERPYF VEKFKEEIPR YMIKHQVRPG
LTGWAQINGF RGDTSIRKRI ECDLYYIENW TLGLDFKILF LTIFKGFINK NAY