| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1211 |
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| Symbol | wcaJ |
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| ID | 4184659 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 1387856 |
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| End bp | 1388455 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638071206 |
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| Product | sugar transferase; UDP-glucose lipid carrier transferase |
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| Protein accession | YP_677824 |
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| Protein GI | 110637617 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.343253 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTTTACA GTTCATTTAT TAAGCCCTTC ATCGATAAAT TAATTGCCAT AAGTACTATT
GGGTGCACAG CTCCACTTTT CCTCCTGATT TCAATTGTAA ATTATGCGCT GTATAAGAAT
GTTTTTTTTA TACAGGAACG CACGGGTTTG CACATGAAAC CGTTTCAATT GATTAAGTTT
CAGACCATGA GAACGATACA GGATGAACAC GGAGTACCTC TGGCAGACAT GAAACGGGTC
ACCGGTTTCG GTAAATTGTT ACGAATTACT TCTATAGACG AACTTCCGCA GCTATTTCTC
GTACTTACAG GGAAGATGAG CCTGGTTGGG CCAAGGCCTT TGCCTGTGTC ATATGATTGT
TACTATACTG AAGAACAACG GTTACGTTTT GAAGCAAAGC CCGGTATTAC CGGTCTGGCG
CAGGTAAATG GCCGTAATGC AACATCGTGG GAGTCACGGT TTCAATTCGA TAGTATGTAT
ATTAAAAACA GATCATTCAG ATTGGATATG CTTATTTTAG CGAAAACATT TTTTCAGCTG
ATGAAATTTA ACGAAGTGAA TGCTTCTGAT TCTATAACTA TGAAACCTTT TAAAAATTAA
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| Protein sequence | MFYSSFIKPF IDKLIAISTI GCTAPLFLLI SIVNYALYKN VFFIQERTGL HMKPFQLIKF
QTMRTIQDEH GVPLADMKRV TGFGKLLRIT SIDELPQLFL VLTGKMSLVG PRPLPVSYDC
YYTEEQRLRF EAKPGITGLA QVNGRNATSW ESRFQFDSMY IKNRSFRLDM LILAKTFFQL
MKFNEVNASD SITMKPFKN
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