| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_2080 |
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| Symbol | |
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| ID | 6273986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 2530804 |
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| End bp | 2531652 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642614142 |
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| Product | sugar transferase |
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| Protein accession | YP_001878670 |
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| Protein GI | 187736558 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 0.262158 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGCCC CTATAACTAA TATCCCCTTC AGCAACCCGC TGTATCGTAA TCATAATTTT
TACAGACGCT ACGGAAAACG CGCCCTGGAT TTCACGGGTG CACTCTTCGG CCTTATATGC
CTGTTTCCGG TATTAGCCAT TCTGGCTATT CTGCTGGCCA TCGTCCAGCG GACATCTCCC
TTCTTCCTGC AAAAGCGCAT CGGGCACGGC CTCAAACCCT TTCATATCAT CAAATTCAAA
ACCATGAAAG ACACCAGGGA CAAGGAAGGG AACCTGCTCC CGGACGAAGA ACGCACAACA
GTCCTGGGCT CCCTGCTGCG CAGCACCTCC CTGGACGAAC TGCCTGAACT CATCAACGTT
CTGCTGGGGG ACATGAGCTT TATCGGCCCA CGCCCCTGGA TTCCCGATCA AATGGCCATT
TTTACCCCTT CCACCCGGAA AAAAAGAATG TCCCTGCGCC CGGGCATCAC GGGGCTGGCC
CAGATTCGCG GGCGCAACAA CCTCACCTTC CGCCAGCGGG TATGTTATGA CCTGAGCTAC
CAACGCCACC TGACCTTTCG GTACGACCTG AATATCCTTT TTTACACCTT CCTCAAGGTT
GTCGAGAGAG AAGGCATTCA ACAGCGACCG GATGCCCTGA GCACACCGGC CCGTGTACTG
AAGCCCAGGG ATTTGATGAC CTACGGATTA AAAGAAAATA CGCAACTCAT CTTAAGAAGT
ATCCGAAAAG AACCCGTCCC ATCCTTGAGC GTACCCGACC ATCCCTTGAC CCCCAAAGAC
CTGCCGACCA AAGGCCTTAG GGCAAATACC CAGCTTATCA TGAGGAGCCG TCAGAAAAGC
GTCCAATAA
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| Protein sequence | MSAPITNIPF SNPLYRNHNF YRRYGKRALD FTGALFGLIC LFPVLAILAI LLAIVQRTSP
FFLQKRIGHG LKPFHIIKFK TMKDTRDKEG NLLPDEERTT VLGSLLRSTS LDELPELINV
LLGDMSFIGP RPWIPDQMAI FTPSTRKKRM SLRPGITGLA QIRGRNNLTF RQRVCYDLSY
QRHLTFRYDL NILFYTFLKV VEREGIQQRP DALSTPARVL KPRDLMTYGL KENTQLILRS
IRKEPVPSLS VPDHPLTPKD LPTKGLRANT QLIMRSRQKS VQ
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