Gene Cagg_2000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2000 
Symbol 
ID7268916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2446408 
End bp2447055 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content56% 
IMG OID643566831 
ProductUndecaprenyl-phosphate galactose phosphotransferase 
Protein accessionYP_002463324 
Protein GI219848891 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2148] Sugar transferases involved in lipopolysaccharide synthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.731568 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACCGTC GTTATGGAAA ACGGCTGCTT GATCTGATGA TCGTTATTCC GGCCCTGATC 
GTGCTGGCGC CGGTGATGGC ACTCATCGCC ATCCTGGTGC GCATCAACCT CGGCCCCGGT
ATCTTTTTCC GGCAGCAGCG GCCCGGCTTG TATGGCCGCC CGTTTACCAT GCTGAAGTTT
CGTACCATGA CCAACGCCTG TGACGCACAG GGTAATCTCT TGCCCGACGA ACAACGACTC
ACGCGGTTTG GTCGTTTTTT ACGCAGTACC AGTCTTGACG AACTCCCCGA ACTGTTCTGT
GTGTTGCGTG GTGAAATGAG CTTAGTCGGG CCGCGACCGC TGCTCATGCA ATATCTGGAC
CGGTATACTC CTGAGCAACG CCGCCGGCAC GAGGTGTTAC CGGGCATTAC CGGGTTGGCC
CAGATCAACG GACGCAACGC ACTTTCGTGG GATGCGAAGT TTGCCTACGA TGTCTATTAC
GTCGACCACT TATCGCTATG GCTTGATCTG AAGATTTTGG CTCTGACCTG CTGGAAAGTA
TTACAGCGTG AAGGGATTAG CCAACCCGGC CACGCTACCG CCGAAGAGTT TCGTGGTTCG
CCCCCGCGCA TCCCACCGTC ACCAATTCAA CCCGAAAGCC CGTTGTGA
 
Protein sequence
MYRRYGKRLL DLMIVIPALI VLAPVMALIA ILVRINLGPG IFFRQQRPGL YGRPFTMLKF 
RTMTNACDAQ GNLLPDEQRL TRFGRFLRST SLDELPELFC VLRGEMSLVG PRPLLMQYLD
RYTPEQRRRH EVLPGITGLA QINGRNALSW DAKFAYDVYY VDHLSLWLDL KILALTCWKV
LQREGISQPG HATAEEFRGS PPRIPPSPIQ PESPL