More than 300 homologs were found in PanDaTox collection
for query gene RS02342 on replicon NC_003296
Organism: Ralstonia solanacearum GMI1000



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_003296  RS02342  glycosyl transferase transmembrane protein  100 
 
 
203 aa  405  1.0000000000000001e-112  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.0378569 
 
 
-
 
NC_011662  Tmz1t_1126  Undecaprenyl-phosphate galactose phosphotransferase  68.69 
 
 
201 aa  297  8e-80  Thauera sp. MZ1T  Bacteria  normal  0.0875109  n/a   
 
 
-
 
NC_007973  Rmet_2726  sugar transferase  70.05 
 
 
197 aa  292  3e-78  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_3034  undecaprenyl-phosphate galactose phosphotransferase  72.31 
 
 
197 aa  287  8e-77  Acidovorax sp. JS42  Bacteria  normal  0.104666  normal 
 
 
-
 
NC_012791  Vapar_1934  Undecaprenyl-phosphate galactose phosphotransferase  71.88 
 
 
199 aa  285  2e-76  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007969  Pcryo_0636  undecaprenyl-phosphate galactosephosphotransferase  65.31 
 
 
207 aa  281  4.0000000000000003e-75  Psychrobacter cryohalolentis K5  Bacteria  normal  0.678977  normal  0.34007 
 
 
-
 
NC_009483  Gura_1698  undecaprenyl-phosphate galactose phosphotransferase  66.33 
 
 
204 aa  273  9e-73  Geobacter uraniireducens Rf4  Bacteria  normal  0.965123  n/a   
 
 
-
 
NC_009523  RoseRS_4262  undecaprenyl-phosphate galactose phosphotransferase  68.53 
 
 
206 aa  270  9e-72  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_012793  GWCH70_3256  Undecaprenyl-phosphate galactose phosphotransferase  61.62 
 
 
207 aa  266  1e-70  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_010831  Cphamn1_0384  sugar transferase  62.69 
 
 
202 aa  262  3e-69  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_1664  undecaprenyl-phosphate galactose phosphotransferase  64.65 
 
 
199 aa  259  1e-68  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_1345  undecaprenyl-phosphate galactose phosphotransferase  67.01 
 
 
206 aa  258  5.0000000000000005e-68  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.940885 
 
 
-
 
NC_007348  Reut_B5365  undecaprenyl-phosphate galactosephosphotransferase  66.33 
 
 
205 aa  253  2.0000000000000002e-66  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_3389  sugar transferase  57.64 
 
 
204 aa  249  1e-65  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.251832  n/a   
 
 
-
 
NC_012560  Avin_30050  sugar transferase family protein  71.07 
 
 
198 aa  249  2e-65  Azotobacter vinelandii DJ  Bacteria  normal  0.0103418  n/a   
 
 
-
 
NC_007519  Dde_0362  lipopolysaccharide synthesis sugar transferase  63.08 
 
 
598 aa  243  9.999999999999999e-64  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_2648  undecaprenyl-phosphate galactosephosphotransferase  58.38 
 
 
200 aa  241  3.9999999999999997e-63  Shewanella denitrificans OS217  Bacteria  normal  0.679598  n/a   
 
 
-
 
NC_011060  Ppha_0574  Undecaprenyl-phosphate galactose phosphotransferase  60.1 
 
 
200 aa  241  3.9999999999999997e-63  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.2884  n/a   
 
 
-
 
NC_013440  Hoch_5256  Undecaprenyl-phosphate galactose phosphotransferase  63.08 
 
 
204 aa  241  7e-63  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_011661  Dtur_0586  Undecaprenyl-phosphate galactose phosphotransferase  56.5 
 
 
206 aa  240  1e-62  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A2483  sugar transferase  56.28 
 
 
219 aa  239  1e-62  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2000  Undecaprenyl-phosphate galactose phosphotransferase  60.62 
 
 
215 aa  236  1e-61  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.731568 
 
 
-
 
NC_008009  Acid345_3821  undecaprenyl-phosphate galactosephosphotransferase  58.76 
 
 
206 aa  236  1e-61  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.529495 
 
 
-
 
NC_013162  Coch_0716  sugar transferase  56.92 
 
 
207 aa  236  2e-61  Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_4005  sugar transferase  61.22 
 
 
206 aa  231  7.000000000000001e-60  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_013522  Taci_0038  Undecaprenyl-phosphate galactose phosphotransferase  65.45 
 
 
210 aa  227  9e-59  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_008787  CJJ81176_1141  general glycosylation pathway protein  52.79 
 
 
200 aa  223  1e-57  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  0.987369  n/a   
 
 
-
 
NC_009802  CCC13826_0450  Cpp29  49.75 
 
 
201 aa  223  2e-57  Campylobacter concisus 13826  Bacteria  normal  n/a   
 
 
-
 
NC_003912  CJE1266  general glycosylation pathway protein  52.28 
 
 
200 aa  221  4.9999999999999996e-57  Campylobacter jejuni RM1221  Bacteria  normal  n/a   
 
 
-
 
NC_009707  JJD26997_0597  general glycosylation pathway protein  52.79 
 
 
200 aa  220  9.999999999999999e-57  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  0.392245  n/a   
 
 
-
 
NC_009715  CCV52592_1211  putative sugar transferase  52.28 
 
 
201 aa  220  9.999999999999999e-57  Campylobacter curvus 525.92  Bacteria  normal  n/a   
 
 
-
 
NC_008599  CFF8240_1381  general glycosylation pathway protein  49.24 
 
 
201 aa  218  3.9999999999999997e-56  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_5254  Undecaprenyl-phosphate galactose phosphotransferase  54.68 
 
 
207 aa  216  1e-55  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_009714  CHAB381_0952  general glycosylation pathway protein  48.22 
 
 
201 aa  216  2.9999999999999998e-55  Campylobacter hominis ATCC BAA-381  Bacteria  normal  n/a   
 
 
-
 
NC_014230  CA2559_10743  putative undecaprenyl-phosphate glycosyl-1-phosphate transferase  53.03 
 
 
202 aa  214  5e-55  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.335264  n/a   
 
 
-
 
NC_009523  RoseRS_3644  undecaprenyl-phosphate galactose phosphotransferase  54.4 
 
 
217 aa  214  5.9999999999999996e-55  Roseiflexus sp. RS-1  Bacteria  normal  0.212728  normal 
 
 
-
 
NC_012039  Cla_1255  galactosyltransferase  52.55 
 
 
200 aa  211  4.9999999999999996e-54  Campylobacter lari RM2100  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_5393  UDP-galactose phosphate transferase  52.38 
 
 
230 aa  211  7e-54  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_0494  undecaprenyl-phosphate galactose phosphotransferase  52.33 
 
 
219 aa  210  1e-53  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.664632  normal 
 
 
-
 
NC_010718  Nther_2523  Undecaprenyl-phosphate galactose phosphotransferase  52.2 
 
 
226 aa  202  3e-51  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  hitchhiker  0.00181679 
 
 
-
 
NC_009253  Dred_3047  sugar transferase  48.44 
 
 
243 aa  196  2.0000000000000003e-49  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_1529  putative YVfC-like sugar transferase  56.52 
 
 
226 aa  195  5.000000000000001e-49  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_2344  undecaprenyl-phosphate galactose phosphotransferase  49.74 
 
 
232 aa  188  4e-47  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_0763  Undecaprenyl-phosphate galactose phosphotransferase  47.45 
 
 
219 aa  172  2.9999999999999996e-42  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_3631  sugar transferase  44.09 
 
 
190 aa  155  3e-37  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.666703 
 
 
-
 
NC_007298  Daro_1277  sugar transferase  48.66 
 
 
186 aa  155  3e-37  Dechloromonas aromatica RCB  Bacteria  normal  0.0679585  normal 
 
 
-
 
NC_010655  Amuc_2080  sugar transferase  44.74 
 
 
282 aa  154  7e-37  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  normal  0.262158 
 
 
-
 
NC_008255  CHU_1211  sugar transferase; UDP-glucose lipid carrier transferase  41.45 
 
 
199 aa  154  8e-37  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.343253  normal 
 
 
-
 
NC_014148  Plim_0633  Undecaprenyl-phosphate galactose phosphotransferase  46.03 
 
 
196 aa  152  2.9999999999999998e-36  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.339085  n/a   
 
 
-
 
NC_009620  Smed_4579  sugar transferase  46.45 
 
 
226 aa  152  4e-36  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_013170  Ccur_08350  glycosyl transferase possibly involved in lipopolysaccharide synthesis  38.46 
 
 
201 aa  148  5e-35  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.163172  normal  0.229141 
 
 
-
 
NC_007517  Gmet_1337  sugar transferase  44.92 
 
 
186 aa  148  6e-35  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.0288404 
 
 
-
 
NC_008751  Dvul_2699  undecaprenyl-phosphate galactose phosphotransferase  44.16 
 
 
477 aa  148  7e-35  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.438937 
 
 
-
 
NC_007498  Pcar_1519  sugar transferase  40.64 
 
 
214 aa  147  1.0000000000000001e-34  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_0097  Undecaprenyl-phosphate galactose phosphotransferase  50 
 
 
208 aa  146  2.0000000000000003e-34  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_1263  sugar transferase  47.57 
 
 
186 aa  146  2.0000000000000003e-34  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_3985  sugar transferase  46.49 
 
 
186 aa  145  3e-34  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_1939  undecaprenyl-phosphate galactose phosphotransferase  43.37 
 
 
496 aa  145  3e-34  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_02670  exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase  47.42 
 
 
480 aa  145  5e-34  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_4061  undecaprenyl-phosphate galactose phosphotransferase  43.81 
 
 
522 aa  145  5e-34  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_4990  undecaprenyl-phosphate glucose phosphotransferase  43.46 
 
 
491 aa  144  6e-34  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_013216  Dtox_2852  Undecaprenyl-phosphate galactose phosphotransferase  41.94 
 
 
208 aa  145  6e-34  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_1586  sugar transferase  46.77 
 
 
187 aa  144  7.0000000000000006e-34  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.0491146  normal 
 
 
-
 
NC_008146  Mmcs_1295  undecaprenyl-phosphate galactosephosphotransferase  44.56 
 
 
496 aa  143  1e-33  Mycobacterium sp. MCS  Bacteria  normal  0.222797  n/a   
 
 
-
 
NC_009077  Mjls_1331  undecaprenyl-phosphate galactose phosphotransferase  44.56 
 
 
496 aa  143  1e-33  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008705  Mkms_1312  undecaprenyl-phosphate galactose phosphotransferase  44.56 
 
 
496 aa  143  1e-33  Mycobacterium sp. KMS  Bacteria  normal  0.454785  normal  0.17822 
 
 
-
 
NC_012034  Athe_0062  Undecaprenyl-phosphate glucose phosphotransferase  42.22 
 
 
457 aa  143  2e-33  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_0418  exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase  42.25 
 
 
495 aa  142  2e-33  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_011365  Gdia_0736  exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase  44.39 
 
 
500 aa  142  3e-33  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.710703  normal 
 
 
-
 
NC_008261  CPF_0595  sugar transferase family protein  35.23 
 
 
220 aa  142  3e-33  Clostridium perfringens ATCC 13124  Bacteria  normal  0.750917  n/a   
 
 
-
 
NC_009675  Anae109_2622  undecaprenyl-phosphate galactose phosphotransferase  52.69 
 
 
215 aa  142  4e-33  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_1001  exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase  47.42 
 
 
491 aa  142  4e-33  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_0147  sugar transferase  37.16 
 
 
185 aa  141  5e-33  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_011666  Msil_3537  exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase  42.25 
 
 
488 aa  142  5e-33  Methylocella silvestris BL2  Bacteria  n/a    normal  0.0569176 
 
 
-
 
NC_009632  SaurJH1_0152  sugar transferase  37.16 
 
 
185 aa  141  5e-33  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A2310  undecaprenyl-phosphate galactose phosphotransferase  39.39 
 
 
476 aa  141  6e-33  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal  0.0185633 
 
 
-
 
NC_011830  Dhaf_4475  Undecaprenyl-phosphate glucose phosphotransferase  41.11 
 
 
463 aa  141  6e-33  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A2421  undecaprenyl-phosphate galactose phosphotransferase  39.39 
 
 
476 aa  141  7e-33  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.832514  hitchhiker  0.00533512 
 
 
-
 
NC_011080  SNSL254_A2261  undecaprenyl-phosphate galactose phosphotransferase  39.39 
 
 
476 aa  141  7e-33  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  hitchhiker  0.0072659 
 
 
-
 
NC_011083  SeHA_C2308  undecaprenyl-phosphate galactose phosphotransferase  39.39 
 
 
476 aa  141  7e-33  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal  0.0214166 
 
 
-
 
NC_013947  Snas_1293  exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase  46.39 
 
 
485 aa  140  9.999999999999999e-33  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_011761  AFE_1370  undecaprenyl-phosphate galactosephosphotransferase, putative  43.94 
 
 
484 aa  140  9.999999999999999e-33  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.419276  n/a   
 
 
-
 
NC_011831  Cagg_1979  exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase  44.1 
 
 
457 aa  140  9.999999999999999e-33  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.0160004 
 
 
-
 
NC_007413  Ava_2099  sugar transferase  39.69 
 
 
252 aa  139  1.9999999999999998e-32  Anabaena variabilis ATCC 29413  Bacteria  normal  0.672919  hitchhiker  0.000893553 
 
 
-
 
NC_011662  Tmz1t_1597  sugar transferase, PEP-CTERM system associated  41.05 
 
 
461 aa  139  1.9999999999999998e-32  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_3223  sugar transferase family protein  43 
 
 
382 aa  139  1.9999999999999998e-32  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_3275  undecaprenyl-phosphate galactosephosphotransferase  43 
 
 
373 aa  139  3e-32  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_4755  undecaprenyl-phosphate galactose phosphotransferase  44.1 
 
 
496 aa  139  3e-32  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.236094  normal 
 
 
-
 
NC_007963  Csal_1693  undecaprenyl-phosphate galactosephosphotransferase  39.25 
 
 
346 aa  139  3e-32  Chromohalobacter salexigens DSM 3043  Bacteria  unclonable  0.0000000262579  n/a   
 
 
-
 
NC_009076  BURPS1106A_3261  sugar transferase family protein  43 
 
 
382 aa  139  3e-32  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_3388  sugar transferase  42.78 
 
 
186 aa  139  3e-32  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_0911  Undecaprenyl-phosphate galactose phosphotransferase  45.18 
 
 
319 aa  139  3.9999999999999997e-32  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_0035  exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase  43.52 
 
 
487 aa  137  7e-32  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.179777 
 
 
-
 
NC_011894  Mnod_5883  Undecaprenyl-phosphate glucose phosphotransferase  43.68 
 
 
482 aa  137  7.999999999999999e-32  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.179814  n/a   
 
 
-
 
NC_008009  Acid345_2726  undecaprenyl-phosphate galactosephosphotransferase  40.54 
 
 
451 aa  137  8.999999999999999e-32  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_4131  sugar transferase  41.05 
 
 
525 aa  137  1e-31  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0135201  normal 
 
 
-
 
NC_012560  Avin_16230  undecaprenyl-phosphate galactosephosphotransferase  39.78 
 
 
459 aa  137  1e-31  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_3127  exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase  42.47 
 
 
501 aa  137  1e-31  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.526829  normal 
 
 
-
 
NC_008530  LGAS_1153  lipopolysaccharide synthesis sugar transferase  38.42 
 
 
219 aa  137  1e-31  Lactobacillus gasseri ATCC 33323  Bacteria  hitchhiker  0.000000000000801839  hitchhiker  0.000000000000434208 
 
 
-
 
NC_010623  Bphy_3274  undecaprenyl-phosphate galactose phosphotransferase  43.88 
 
 
203 aa  137  1e-31  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>