Gene Sala_1586 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1586 
Symbol 
ID4083023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1662430 
End bp1662993 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content58% 
IMG OID638009955 
Productsugar transferase 
Protein accessionYP_616632 
Protein GI103487071 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2148] Sugar transferases involved in lipopolysaccharide synthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0491146 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAAAAA GAGTATTCGA CCTGATGCTC GCTTCGCTTA CTGTCATTCT GCTGGCCCCG 
TTGATGCTTT GCGTGGCGCT TGCGATCCGT CTGGATTCGG CGGGGCCAGC GGTGTTCTGG
TCGCAGCGTT TTGGCCGTGA CGGGCGATTG TTCCTGATGC CGAAGTTTCG GACGATGCAC
ATCGACACCC CGCTGCTTCC GACACATTTG CTTCGGGACG GCGCGAGCCG GGTGACGCGC
CTTGGGCGCT TTTTGCGGCG CACCAGCCTT GATGAGTTGC CGCAGCTTTT CAGTGTTATC
GCCGGAGACA TGAGCCTGGT GGGGCCCCGG CCAGCGCTAT TCAACCAAGA TGATCTGATG
CGTTTGAGGG CGGAATGCGG CGTTACCGCG CTTCGGCCTG GAATAACCGG CTGGGCGCAG
ATCAACGGCC GCGACGAACT TACGATCTCA GAGAAAGTGA CGTTGGAGCG TGAATATCTG
GCTCGAATGA GCCTCGCCTT CGACGTAAAG ATCCTGATCC TTACGATAGT GCGGGTTCTG
GATCGCCGCA GCATTTCGCA TTGA
 
Protein sequence
MIKRVFDLML ASLTVILLAP LMLCVALAIR LDSAGPAVFW SQRFGRDGRL FLMPKFRTMH 
IDTPLLPTHL LRDGASRVTR LGRFLRRTSL DELPQLFSVI AGDMSLVGPR PALFNQDDLM
RLRAECGVTA LRPGITGWAQ INGRDELTIS EKVTLEREYL ARMSLAFDVK ILILTIVRVL
DRRSISH