Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1586 |
Symbol | |
ID | 4083023 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 1662430 |
End bp | 1662993 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 638009955 |
Product | sugar transferase |
Protein accession | YP_616632 |
Protein GI | 103487071 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0491146 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAAAAA GAGTATTCGA CCTGATGCTC GCTTCGCTTA CTGTCATTCT GCTGGCCCCG TTGATGCTTT GCGTGGCGCT TGCGATCCGT CTGGATTCGG CGGGGCCAGC GGTGTTCTGG TCGCAGCGTT TTGGCCGTGA CGGGCGATTG TTCCTGATGC CGAAGTTTCG GACGATGCAC ATCGACACCC CGCTGCTTCC GACACATTTG CTTCGGGACG GCGCGAGCCG GGTGACGCGC CTTGGGCGCT TTTTGCGGCG CACCAGCCTT GATGAGTTGC CGCAGCTTTT CAGTGTTATC GCCGGAGACA TGAGCCTGGT GGGGCCCCGG CCAGCGCTAT TCAACCAAGA TGATCTGATG CGTTTGAGGG CGGAATGCGG CGTTACCGCG CTTCGGCCTG GAATAACCGG CTGGGCGCAG ATCAACGGCC GCGACGAACT TACGATCTCA GAGAAAGTGA CGTTGGAGCG TGAATATCTG GCTCGAATGA GCCTCGCCTT CGACGTAAAG ATCCTGATCC TTACGATAGT GCGGGTTCTG GATCGCCGCA GCATTTCGCA TTGA
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Protein sequence | MIKRVFDLML ASLTVILLAP LMLCVALAIR LDSAGPAVFW SQRFGRDGRL FLMPKFRTMH IDTPLLPTHL LRDGASRVTR LGRFLRRTSL DELPQLFSVI AGDMSLVGPR PALFNQDDLM RLRAECGVTA LRPGITGWAQ INGRDELTIS EKVTLEREYL ARMSLAFDVK ILILTIVRVL DRRSISH
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