20 homologs were found in PanDaTox collection
for query gene Rcas_2121 on replicon NC_009767
Organism: Roseiflexus castenholzii DSM 13941



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009767  Rcas_2121  response regulator receiver/SARP domain-containing protein  100 
 
 		 333 aa  686    Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  0.782958 
 
 
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NC_009523  RoseRS_3491  response regulator receiver/SARP domain-containing protein  63.77 
 
 		 360 aa  433  1e-120  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
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NC_011831  Cagg_2883  response regulator receiver and SARP domain protein  41.12 
 
 		 331 aa  233  3e-60  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.000114352  decreased coverage  0.00395657 
 
 
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NC_009767  Rcas_2653  response regulator receiver/SARP domain-containing protein  28.41 
 
 		 572 aa  62  0.00000001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  1 
 
 
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NC_013131  Caci_6503  transcriptional regulator, SARP family  28.12 
 
 		 252 aa  59.7  0.00000006  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.287037  normal  0.225314 
 
 
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NC_009485  BBta_1607  hypothetical protein  25.2 
 
 		 428 aa  56.6  0.0000006  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008346  Swol_0292  hypothetical protein  26.22 
 
 		 954 aa  52  0.00001  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  hitchhiker  0.0090168  n/a   
 
 
-
 
NC_009523  RoseRS_1512  response regulator receiver/SARP domain-containing protein  25.64 
 
 		 561 aa  52.4  0.00001  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  0.0226395 
 
 
-
 
NC_013165  Shel_24290  DNA-binding transcriptional activator of the SARP family  26.27 
 
 		 392 aa  52  0.00001  Slackia heliotrinireducens DSM 20476  Bacteria  normal  1  normal  1 
 
 
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NC_009767  Rcas_0060  transcriptional activator domain-containing protein  26.11 
 
 		 1145 aa  47.4  0.0003  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_7082  transcriptional regulator, SARP family  31.45 
 
 		 990 aa  46.6  0.0006  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  0.379783 
 
 
-
 
NC_013093  Amir_5677  transcriptional regulator, SARP family  24.59 
 
 		 965 aa  45.8  0.001  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_008346  Swol_0173  ATP-dependent transcriptional regulator-like protein  22.14 
 
 		 1111 aa  45.1  0.002  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  1  n/a   
 
 
-
 
NC_009953  Sare_4552  transcriptional regulator  27.06 
 
 		 1043 aa  44.7  0.002  Salinispora arenicola CNS-205  Bacteria  normal  1  normal  0.01867 
 
 
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NC_013947  Snas_4166  transcriptional regulator, winged helix family  28.57 
 
 		 1049 aa  43.9  0.004  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  0.497343 
 
 
-
 
NC_009953  Sare_4854  SARP family transcriptional regulator  23.56 
 
 		 786 aa  43.9  0.004  Salinispora arenicola CNS-205  Bacteria  normal  1  normal  0.0558013 
 
 
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NC_013595  Sros_7741  transcriptional regulator, SARP family  27.33 
 
 		 1013 aa  43.5  0.005  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0132103  normal  1 
 
 
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NC_013159  Svir_29840  DNA-binding transcriptional activator of the SARP family  24.75 
 
 		 496 aa  43.1  0.006  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  1 
 
 
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NC_013235  Namu_1911  transcriptional regulator domain protein  26.03 
 
 		 990 aa  43.1  0.007  Nakamurella multipartita DSM 44233  Bacteria  normal  0.345318  decreased coverage  0.000588756 
 
 
-
 
NC_009523  RoseRS_3322  transcriptional activator domain-containing protein  25.46 
 
 		 1204 aa  42.4  0.01  Roseiflexus sp. RS-1  Bacteria  normal  0.11039  normal  0.190141 
 
 
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