| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7082 |
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| Symbol | |
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| ID | 8338449 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 8233747 |
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| End bp | 8236719 |
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| Gene Length | 2973 bp |
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| Protein Length | 990 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644960163 |
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| Product | transcriptional regulator, SARP family |
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| Protein accession | YP_003117753 |
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| Protein GI | 256396189 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3629] DNA-binding transcriptional activator of the SARP family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.379783 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTGGTGC AGTACGGGCT GCTCGGACCG GTCCGCGCGC TGCGAGTGGG CGCCGCGGGA
GAACCAGCCG AGGAGCTCAA AGTGGGGTCC CCGCAACAGC AGGCCGTGCT GGCGCTGCTG
GCGTCACGGG CCGGTCGGGT GGCGACAGCC GACGAACTCA TCGAGGGTCT GTGGGGCGAC
GAGCCGCCGG AGGGTGCGCT CGGTACGGTG CGCACGTACG CGTTCCGACT CCGTAAGGTC
TTCGGTGCCG AAGCCATAGC GTCCATCGCC GGTGGCTATG CGTTACGCGC GGAGCGTTCG
CACGTGGACT TGTTCACGTT CGAGGATCAT GTCGCGGCAG CGGAGCAGCG CCGGATGTCC
GGGGACGTCG TGGGCGCGCG TGGAGAACTC GCTAATGCGT TGGCGCTATG GCGAGGCACT
CCGTTGGCCG GGATACCGGG CCCTTATGCG GAGTCCCTGC GCGCGACGCT CTTGGAGCGG
CGTACCGCTG CGCAGGAGAG CCGCATCGCC TTGGATTTGG CGTTGGGGCG TGTAGGAGAC
GCCGTTTCCG AACTCACGGT CCTCACCGCT GAACACCCGC TGCGTGAGGG ACTGCGTGCG
CAGCTGATGC TGGCGCTCTA TCAGACCGGA CGACAGGCCG AGGCGCTAGG CGTCTACGCA
GATACTCGAC GGCTGCTGCG CAAGGAACTG GGAGTCGATC CCGGCGCAGA GCTCGGCGAA
CTGCATCAGC GGATCCTGCG TGCCGACCCG TCCTTGGCGC GTCCTTCTGC CGACAGTGCC
GAGATCGCCC CGAGAGCGGC TGAGGCTTCT GCGGGGACCG CTTTGGAGAA GCCGCCTACG
ATCCCTGCGC AGCTTCCTGC TGACACAGCC GACTTCACCG GACGCGAGAA CCTGACGCGC
GTGCTCGCGG CGCGGATATC CACGACGGTC GGGCAGTCGG TGGCGGTCTG TGCGCTGTCC
GGGCTCGGCG GAGTCGGCAA GACGGCGCTC GCCATCCACT TGGCGCACTC GGTGCGGGAG
GAGTTTCCCG ACGGGCAGCT CTATGTGGAC CTGCGCGGAG GCGACCCGAC GCCGGCAGAC
CCTGCGCCGG TTCTCGCAGC GTTCCTGCGG GGTCTGGGGA TCTCGGAGGG CGAGACTGCG
CCAGGGCTGG AGGAGAGGGC TGCGGCGTAT CGGTCGGCGC TCGCCGGTCG GAGGGTTCTG
ATCGTCCTGG ACAACGCCCG GGACGCCGCG CAAGTACGGC CTCTGCTGCC CGGCGCTCCG
GGGTGCGCGG TCATCGTCAC GAGCCGGCCG AAGCTGACCG GGTTGGCCGG GGCGACGTTC
GCTGATCTCG ACGTGCTGGA TCCCGGCGAG GCGATGAACA TGTTCACGCG GATCGTCGGC
GAGGAACGCC TAGGGATGGA GCACACCGCG GCTATAGACG TGGTGTCCCT CTGCGGATAC
TTGCCTCTGG CGGTGCGTAT AGCGGCCGCA CGGCTCGCGT CCCGACCGCG CTGGCGTATC
GGGTCGCTCG CGGCGCGGTT GTCCGACGAG CGGCGCCGGC TGGGCGAACT GGCTGTGGGC
GACCTCGCGG TGCGCGCGGC GTTCGAACTG GGCTACCACC AGTTGTCCCC GGCGCAGGCG
GATGTCTTCC GGCGGCTGTC GCAGCTGAAC AGCGCTGACG TGTCGGCTGC TGCGGCGGCC
GCGCTGCTCG GCCAGGACGA GGCCGACACC GAGGAAGTGC TGGAGTCGCT GGTGGATGCC
GCGATGCTGG AGTCTTCGTC TCCGGGGCGC TACCGCTATC ACGACTTGCT GCGGCTCTAT
GCGCGGGAGC AGTACGCGGC CGAGGGTGGC CTCGACGACG CGGGCTTCGT GAGCCTGCTC
GACTTCTACC TCGCCTCGAT GCGCCGGCTG CGGCGCATCC CGGTGGAGGA GCTCGGTCTT
TTCCCGACGC GGTCCTCTGG GAGGGAGTTC GACTCCGTGG AGGCCGGGGT GCGGTGGATC
GCCGACGAGG GCAGCTGTGT GGACGCGGTG TTCAATCGGC GGGTCCTGAC CGCGCCGCCG
TGCAGCGTCG GGGTGGCGCC GTTGACGCTC GCAGTCGAGC TGCTGGACCA CCTTGTCTCG
CTGCCGGGTA TCGAACGCTA TGCGGATGAG CTCTCTGCGG CGGCGCGTAA CGCTGCCGCA
GCTGCCGTGG AGTCTGGGGA CGTACGGAGT GAGGCGCGTG TACGGCACTC CTTGGCGCGC
ATCCTTTACG CGACGTACCA GATCGAGGCT GCTGCCGAGG AGGCTGAGCG ATCGCACCGC
GCCGCCGAGT CGGTCGGCGG CGACGAGACT CAGGCGGACG CCGTCAATCT GCTCGCGATG
ACGTATGCGG ACCTTGGGAG GGACGCGGAG GCGATCGCGC TGTACGAGCG CGCTGTCGAC
GTCAGCCGGG AGTTCGGGGA CGTGGCGTCC GAGGCGGCCG CGCGGCAGAA CATGGCGCGC
TCGCTGCTGG TGTTGGGTCG GACGGAGCAG GCACTGCAGA GCACTATGGC GGGACTTGCC
TTGTGTCGCG CCTTGGGGGA CGACGTGTCC ACCGGGTACG CGCTCTTCCA GACAGGTTCC
ATCTACCTGC AGACGCTCGC CTATAGGGAG TCCCTGACGT ACTTCACGGA GGCGGCTCGG
TACTTCGCCG ACGTGCATCC GCCTATGGAG GGTGCTGCGC ACGCCTCCAG CGCGCGGGCT
CTGTTGGGAC TCGGCGAGCC CAGCGGCGCG CTGGAGCATG CCGAGCGTGC GGTGAGTGTG
CTGCGGGGGA CCGCCGACAC CTGGCAGCAC GCGACGGCGC TCGCGGTGCT GGCTGACGTG
CTGGATGTCG CCGGGCAGCC GGAGCGGGCG CGGGGTTGTC GGGAGGAAGC GTTGGCGATG
TTCGTCGTGA TCGGCGCGCC GGAGGCTGAA CGTATCAGGG TCATGCTCTC CGGCTCGGAA
GCAACCTTCA CGGCGGTTCG AACGTCGCGC TAA
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| Protein sequence | MVVQYGLLGP VRALRVGAAG EPAEELKVGS PQQQAVLALL ASRAGRVATA DELIEGLWGD
EPPEGALGTV RTYAFRLRKV FGAEAIASIA GGYALRAERS HVDLFTFEDH VAAAEQRRMS
GDVVGARGEL ANALALWRGT PLAGIPGPYA ESLRATLLER RTAAQESRIA LDLALGRVGD
AVSELTVLTA EHPLREGLRA QLMLALYQTG RQAEALGVYA DTRRLLRKEL GVDPGAELGE
LHQRILRADP SLARPSADSA EIAPRAAEAS AGTALEKPPT IPAQLPADTA DFTGRENLTR
VLAARISTTV GQSVAVCALS GLGGVGKTAL AIHLAHSVRE EFPDGQLYVD LRGGDPTPAD
PAPVLAAFLR GLGISEGETA PGLEERAAAY RSALAGRRVL IVLDNARDAA QVRPLLPGAP
GCAVIVTSRP KLTGLAGATF ADLDVLDPGE AMNMFTRIVG EERLGMEHTA AIDVVSLCGY
LPLAVRIAAA RLASRPRWRI GSLAARLSDE RRRLGELAVG DLAVRAAFEL GYHQLSPAQA
DVFRRLSQLN SADVSAAAAA ALLGQDEADT EEVLESLVDA AMLESSSPGR YRYHDLLRLY
AREQYAAEGG LDDAGFVSLL DFYLASMRRL RRIPVEELGL FPTRSSGREF DSVEAGVRWI
ADEGSCVDAV FNRRVLTAPP CSVGVAPLTL AVELLDHLVS LPGIERYADE LSAAARNAAA
AAVESGDVRS EARVRHSLAR ILYATYQIEA AAEEAERSHR AAESVGGDET QADAVNLLAM
TYADLGRDAE AIALYERAVD VSREFGDVAS EAAARQNMAR SLLVLGRTEQ ALQSTMAGLA
LCRALGDDVS TGYALFQTGS IYLQTLAYRE SLTYFTEAAR YFADVHPPME GAAHASSARA
LLGLGEPSGA LEHAERAVSV LRGTADTWQH ATALAVLADV LDVAGQPERA RGCREEALAM
FVVIGAPEAE RIRVMLSGSE ATFTAVRTSR
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