| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4854 |
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| Symbol | |
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| ID | 5707633 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 5508643 |
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| End bp | 5511003 |
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| Gene Length | 2361 bp |
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| Protein Length | 786 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641274250 |
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| Product | SARP family transcriptional regulator |
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| Protein accession | YP_001539595 |
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| Protein GI | 159040342 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3629] DNA-binding transcriptional activator of the SARP family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0558013 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCGACGA CGATCACCAA TCGCACTCTC CAACCGCTGG CCATGCCGGC AGAGCACGCA
GGCATCACCA TTCGCTTACT GGGACCACTA CAGGCCTGGC AGGACGACAC CGAACTCGTG
CTCGGCTCTG GCAACCGGAC CGCCGTCCTC AGCTTCCTCG CACTGCACGC GAACCATGCC
GTGACCCGGG AACAGCTGAT CGCAGCACTG TGGGGTGACG ACCCGCCGGC CAGTGCGACC
GGAAACCTCT ACACGTACAT TTCCTCGTTA CGCCAGATCC TGGATCCGTG TCGACACCGG
TGGTCGGCTG GGCAGGTGCT CACCTCCGGC GGCGGCACCT ATCGCCTGCG GGTACGGAAG
CAGGACGTCG ACGCCTTCCG GTTCGAGGCA CTGCGCGAGG AGAGCAAACG GCACCGGACC
ATCGGCGACA GCAGCACGGA ACTGGCCTCA CTCACCGCCG CACTGCGGAT GTGGCAGGGC
ACGGCGCTCG CCGGCGTACC CGGCCCCTTT GCCGAGGCCC AGCGGCAACG CCTGGCGGAG
CTCCGGTTGA CCACCGCGGA ACGGCACGCC ACGCTGCTCG TCGAAACCGG CCGTCACGAC
GAGGCCATCT CGACGCTCCG CACGCTGATC GAGGCTCATC CAACTCGAGA GAACCTCGCT
CCCCTGCTGA CAGCGGCTCT CCACGCCGCG GGCCGAGCGG ATGTGCCACG TCGTCCGCGC
CCTCCCGTAC CGACGGAGCC CGCGGGTCAC GTACCAGCGT CACCACGACG AACCGGCACC
AGGTCGCCGG TACGAGCAGC CCCTGGATCG CTGGCCGGCC GCGAGACAGA AATCCGCTGG
CTACGTCGAG CCGTCGTCGA CACGACCCGC GGCCACGGGC GCAGCATCCG CGTCGAGGGC
TTCACGGGAA TGGGCAAGTC GGCACTACTC GCCGTGGCAC TGCCGAGTAC GGCACCGTCC
ACCTGCCGGA TCGGTTGGGC CGTCGGCAGG GAGTTGTCAC AGCGCGTACC GCTGGGACTC
CTGCTGGAGT GCATGGAGTC GGCGTTGGCT GGTGAGCCCA GCAGCGAGCT GGTCCGGCAG
ATCTCGCTGG CCACGAGCCC GTCCATGGGC AACTCGGCCA CTGCGCCGGT TGCCCGGGTG
GTCAGCCTGG TACGACAGGT CGCCCAGCAA GCTCCGCTGG TCCTCGTGGT GGACAACCTG
CATTGGGCTG ATCCACACAC CGTGGAGGCC TGGACGGCCC TACACGAGGT GACGACGCAA
CTGCCGCTCC TTCTCATCGC TACCAGTTGG CCCGGCACCG CCACGCTCGG CACCGCCACG
CTCGGCACCG CCACGCTCGG CACCGCCGAG TTCGGCACCG CCGCCGACGA GGTCCACCAG
CTGGCCCCCC TGAACCGGGC GGCCAGCAGC CACCTGGTGC GTACGGCTGC TCCGGAACCG
CCGGAATCCC CGGAGCTGGA CCATCTCGTG GCGGCCGCCG GGGGTAACCC GTGCTACCTG
TGGCACCTGG CCACAGCGGG TGCCGACCTC AACGGCCAGC TTCCCGCAAG CCTCGTCCGG
GTGGTCCACA CCCACCTCGC CCCATTCACC CAGCCGACCC GGGAGGTACT GCGCGCGGCG
GCCTTCCTCA CTGCTGGACC TGCCGCGCAC GCCGGCCCCG GCTGTTCGCT CAGCGAATTG
GCCGTGGTGA CCGAGCGTCC CACCGCCGAG TTGGTCGAGC TGCTGACGCC GGCCGCACGG
GCCGGCGTCG TCGCCATCAC CGGTGACGGG CTGACATTCC GCCACCCGGT CGTCCCGCGA
GTGCTGCACG AGGGAACGGC CAGCGCGCTA CGAGTCCTGC TGCACCGATC CTTCGCCGAG
CGGATAGCAG GCGCCGGCGG GCCACCCGAG CGGGTCGTCA CCCAGTTACT CGCTGACGCG
GTGCCGTTGG ACGTCACGCT GACCCGCTGG CTCACTACTC ACGTCGAGCA GCTCACCGCC
CGCGCGCCCC GGATCACGGT GACCATCCTG CAACGGGCCC ACGCCCAGTG CACGATGCCG
CCCGCCGACC GCATGACCCT CACCATCTGG CTGGCCCGGC TGCTCCTGCG ATTGGGTCGC
AACTGCGCCG CCGAGGCCGG GTGGGTTGCC TCCCGCACCG ATGACCTCGA CGTGGAAGGC
GAGATGCGGT GGATGGTCGC CCTGACCTAT GAGAAGCGCG GCGAGCACCA GACCGCCGCG
GACATCGCCC GTTCGGTGCT GCACGATCGC CGTGTCCCGG CTCCGTGGCT CGATCGGTTT
CGCCTCATGC AGGCGCGGCT GCGCCAACAC CTGGCCGACC GGCACGACGA CTGTCACCCC
GAAATCGTCA CGTGTACGTA A
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| Protein sequence | MSTTITNRTL QPLAMPAEHA GITIRLLGPL QAWQDDTELV LGSGNRTAVL SFLALHANHA
VTREQLIAAL WGDDPPASAT GNLYTYISSL RQILDPCRHR WSAGQVLTSG GGTYRLRVRK
QDVDAFRFEA LREESKRHRT IGDSSTELAS LTAALRMWQG TALAGVPGPF AEAQRQRLAE
LRLTTAERHA TLLVETGRHD EAISTLRTLI EAHPTRENLA PLLTAALHAA GRADVPRRPR
PPVPTEPAGH VPASPRRTGT RSPVRAAPGS LAGRETEIRW LRRAVVDTTR GHGRSIRVEG
FTGMGKSALL AVALPSTAPS TCRIGWAVGR ELSQRVPLGL LLECMESALA GEPSSELVRQ
ISLATSPSMG NSATAPVARV VSLVRQVAQQ APLVLVVDNL HWADPHTVEA WTALHEVTTQ
LPLLLIATSW PGTATLGTAT LGTATLGTAE FGTAADEVHQ LAPLNRAASS HLVRTAAPEP
PESPELDHLV AAAGGNPCYL WHLATAGADL NGQLPASLVR VVHTHLAPFT QPTREVLRAA
AFLTAGPAAH AGPGCSLSEL AVVTERPTAE LVELLTPAAR AGVVAITGDG LTFRHPVVPR
VLHEGTASAL RVLLHRSFAE RIAGAGGPPE RVVTQLLADA VPLDVTLTRW LTTHVEQLTA
RAPRITVTIL QRAHAQCTMP PADRMTLTIW LARLLLRLGR NCAAEAGWVA SRTDDLDVEG
EMRWMVALTY EKRGEHQTAA DIARSVLHDR RVPAPWLDRF RLMQARLRQH LADRHDDCHP
EIVTCT
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