| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0173 |
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| Symbol | |
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| ID | 4281322 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | - |
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| Start bp | 210317 |
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| End bp | 213652 |
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| Gene Length | 3336 bp |
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| Protein Length | 1111 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638137070 |
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| Product | ATP-dependent transcriptional regulator-like protein |
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| Protein accession | YP_752896 |
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| Protein GI | 114565742 |
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| COG category | [K] Transcription |
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| COG ID | [COG2909] ATP-dependent transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAGAG AATTAATACA TAATAGTATT GTACAAGGGT TGCTTAATAG GAAGGATATG
CACATGGCCA TGGTATCTCT GGTTAATAGC CAGTTAACTC CGCCTCATAT CAAGAATTCC
ATCAAACGCG ACCGGCTTCA GGAATTGGGA CTTTCTATAC TCTCCCACCG GGTTACTACT
ATAACTGCCC CGGCTGGTTA TGGGAAAAGC GTCTGGGTAG CTTCCCTGTT GCAAGAAGAG
GAATGGCCAC CCACAGCTTG GTTGAGCTTG GAAAGATACA ACGGTGATCC TTCTTTTTTC
CTTTATCATT TAATCCATGC TTTTAAAAAA ATCAATCCGG AATACGGCAG TCAATCACTT
CGTACTTTAA ACAGCTTAAG AAACTTAAAA CAGGATTATT TTATCGCAGC TTCAGCTATA
ATACAGGAAT TGCCTCAGGA TCAGGAAATG GTGCTGGTAC TGGACGATTA TCATTTAATT
GACCAAAACC AACTGCTGCC AAAGATTATG GAATATTTAA TTCGGCGTCT TCCGCTTCGC
ACTCATATCA TTGTAATAAG CAGGACGCCT CCTAAGCTGA ATCTTCACCA GGAACTACTA
AAGGGGGAGC TGTTGGAAAT AAGCAGTCAG GCCCTGCTGT TTACTCCGGA AGAAATAAGA
GAACTCCTCT CCCTTGAAGG TTTAGTACTC TCCACCGAAG ACTGTACCTA TATCCATCAT
TGTACAGAAG GATGGGCCGC CGGGGTTCGC TTACTGGGCC TTTCCCTTAA ACAATTTGGT
GGTAATTGGA GAAATAATCT TTCCTCCTTA ACCGGAAAAC ATACCGCTTT ATATATTTAT
TTGAGCCATG AATTATTTAA TTATCTTACC CGGGAATTGC AGGATTTTCT CCTGGATACT
GCAATCTTGC CTTACCTGGA GCCAATTTTA TGCCAGGAGG TATTGGGCGA TACCCGGAGC
GAAGAAAAGA TCCATGAACT TCATCTCATG GGCCTCCTCA GCCAGGTGGA AAGCAATACT
ACCATCTGGC GCTTTCATCA TCTTATAAGG GAATTTCTGC TGGAAAGAGC GCTAAATATA
CGCAGCCCGG AATATATAGT ATCTTTGCGG CGCCGTGCCG CCTTCCATCT CGAGAAAAAC
GGTCATATAG ACCAAGCTTT AGAACAATTA GCTGCATGTG CTGATTGGTC TAAAGCCGCA
GATTTAATCC TGGCTTATGC AGAGCCCTAT TTCCTGGAAA ACGGTTGCCA TAATGCTTTA
TATTCCTGGA TTAAGACTCT GCCCGTCGAT TACTTAAACT CCCATCATCA GCTACTCTAT
TATAAAGGAA TCTGCCTTAG AGACAACCAC CCACAGAAGG CCCAAGAAAT CCTTTCCCGA
GCAGCCGCCC GGGCCCGAGA TAAAGGGGAT GTCAAGGGAG AAATCCGCTC CCTTATGGCT
ATCCTGGCTG TACATATTTT TGGTAATGAC TCCACCCGAA GCGAAGCGGT GGCAGGACGT
ATTCCTGTGA TAGCCTCCAG CCTGAAAGAT AGCTGGGCCC AGGGATTTGC GCTGGTAGCT
GCACTGGGTA AGGCTGTCTC AGAAGATGAC TTGAAACAGG GATTATACTT AAGCCGTCTG
GTAGCCAAAA CTCCTCTGGA GCCAGAATGG CAGTTTTATT ACCTCCTTTT GAGCGGGGTC
GTACACTATC GCCTGGGTAA CCTGGATACA GCCCGGCAAC TGGCTGAAAA AGCCCTGGCT
CTGCCTTTGG TGCAAAAAAG TGATCGCTGG CTTGGCGTTG CTTATGTTCT GCTCTCGGGC
ATTTATTGTG CTAAGGGTGA AATTAGACCG GCTATTGAAA TAAGCCGGCA ACTAATTCAG
CTGGGACATA AATATAATAT CCCCCATCAA ATAGCCTACG GTCATCGTCG TTTAGCCCAG
GTATATCTTC TCCAGGGTAA GCTGGTCGAA GCCCGTTATG AATCCGAACT TTGCAGCGAA
TTGTGGCTTG AAGCCAACAA CGGGGCCATG GCCCGTCATG CTGATTTGGA GACTATCTTC
TTCCGTATTA TAACTGGGGA AAATGCGAAA AACAGCTTCC AGGAAAAGCA GGATTTTATT
AAAATCATTC TAAACAAGCA AAGCGGCTAC GGCTCTAAGG ATTATTCCTT ATCCATCGCC
GGAGTAATAG CCAGAGAAGC AGGGCAAATG GAACAGGCTA GGCAGTGGTT GGAAGAATCG
GCTGCCAGCA GCGAAAAAAA AGGGGCCAAG CAATTATTGG CTGGTACTTT GCTCAATCTA
GCCAGTTTAT ATCTCCTGCT GGGTGATGAA AGCAACGCTG ACCATAAATT ACATAAAGCG
CTGGGTCTTG CCCAGGCAAA TAAAATAGAT ACCTTCTGGG ATTGGCATCC GGAAACAGTA
TATAAAATGT GCCACCGTGC TTTATTAAAA AGCATTTATC CACAATGGGC TTTACACATT
TTACAACGCT GGTTTTCTGA ACGTATATGT GAAGAAGCCA ATCTGTTTTT GGTTAATAAT
GATGAGAATA CCCATAATGC TATCACCACC CTCGTTCAAA ACTATGCTCA ATTTAAGGGT
GTCCCCATTA TTCATGCGAA TTTTATGGGC GGATTCCAAG TTTTCGTGAA TGGGGTAATT
ATTCCTGCTA CACATTGGAA GACCAAAAAA GCAGAGAATC TGTTCAAATA TTTAATTCTC
GATAGACGCC CCCAGAGCAA AGAAAAAATC TTATCCCTCA TATGGCCAAA AACCGATGAC
CCCGCAAGTG ATGCCAATCT TAGAATGGCT CTGACTCATA TACGCCAGGC CCTGAATCTC
TCCCCGAACA GCAACGATAG CATAGTGCTC CGGCGCGGTA TGATTTACCT TAACCCGGAG
ATAAAAGTAT TTACTGATTA TGAACTATTT GTTTCTTTGA GCAAAAAAAT ACTATACCCT
ATCGGAAGAG ACACAAATAG TCTTGAGCAA CTGCATCTTA TGGAAAATGC GGCACGTCTG
TATCAGGGTG AATTATTGCC CGACAATATT TATGAAGATT GGACCTCAAG CCAGCGCCAT
AAATTGCACG ATTTATATAT CCAAATTCAA CTAAAGCGAA TAGAAGCATA TATTCAATCC
GCTCAACCAT CCCGAGCTTT GGAAATCTAC CAAAGCTGCC TGGCCATTGA TCCTATGGAT
GAGCGAATAG TCAAAATCTC CATGGAGCTA CTAATTTCCA ATGGTCAAAG GCACAAGGCC
CTGCAGCTCT ACAAAGACTT TGCCCAGGGT TTAGCTCAAG AATATGGACT AGAACCCTCA
GCTGAAATAA AATCCCTCTA TGAGAGGATT TTTTGA
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| Protein sequence | MQRELIHNSI VQGLLNRKDM HMAMVSLVNS QLTPPHIKNS IKRDRLQELG LSILSHRVTT
ITAPAGYGKS VWVASLLQEE EWPPTAWLSL ERYNGDPSFF LYHLIHAFKK INPEYGSQSL
RTLNSLRNLK QDYFIAASAI IQELPQDQEM VLVLDDYHLI DQNQLLPKIM EYLIRRLPLR
THIIVISRTP PKLNLHQELL KGELLEISSQ ALLFTPEEIR ELLSLEGLVL STEDCTYIHH
CTEGWAAGVR LLGLSLKQFG GNWRNNLSSL TGKHTALYIY LSHELFNYLT RELQDFLLDT
AILPYLEPIL CQEVLGDTRS EEKIHELHLM GLLSQVESNT TIWRFHHLIR EFLLERALNI
RSPEYIVSLR RRAAFHLEKN GHIDQALEQL AACADWSKAA DLILAYAEPY FLENGCHNAL
YSWIKTLPVD YLNSHHQLLY YKGICLRDNH PQKAQEILSR AAARARDKGD VKGEIRSLMA
ILAVHIFGND STRSEAVAGR IPVIASSLKD SWAQGFALVA ALGKAVSEDD LKQGLYLSRL
VAKTPLEPEW QFYYLLLSGV VHYRLGNLDT ARQLAEKALA LPLVQKSDRW LGVAYVLLSG
IYCAKGEIRP AIEISRQLIQ LGHKYNIPHQ IAYGHRRLAQ VYLLQGKLVE ARYESELCSE
LWLEANNGAM ARHADLETIF FRIITGENAK NSFQEKQDFI KIILNKQSGY GSKDYSLSIA
GVIAREAGQM EQARQWLEES AASSEKKGAK QLLAGTLLNL ASLYLLLGDE SNADHKLHKA
LGLAQANKID TFWDWHPETV YKMCHRALLK SIYPQWALHI LQRWFSERIC EEANLFLVNN
DENTHNAITT LVQNYAQFKG VPIIHANFMG GFQVFVNGVI IPATHWKTKK AENLFKYLIL
DRRPQSKEKI LSLIWPKTDD PASDANLRMA LTHIRQALNL SPNSNDSIVL RRGMIYLNPE
IKVFTDYELF VSLSKKILYP IGRDTNSLEQ LHLMENAARL YQGELLPDNI YEDWTSSQRH
KLHDLYIQIQ LKRIEAYIQS AQPSRALEIY QSCLAIDPMD ERIVKISMEL LISNGQRHKA
LQLYKDFAQG LAQEYGLEPS AEIKSLYERI F
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