| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4552 |
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| Symbol | |
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| ID | 5705814 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 5144395 |
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| End bp | 5147526 |
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| Gene Length | 3132 bp |
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| Protein Length | 1043 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641273964 |
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| Product | transcriptional regulator |
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| Protein accession | YP_001539311 |
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| Protein GI | 159040058 |
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| COG category | [R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG3629] DNA-binding transcriptional activator of the SARP family
[COG3903] Predicted ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.01867 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGTCG GGATGCTCGG CCCTCTGCTG GTGACCGCCG GCGGAACCGA GGTGCGGATC
GGTGGTGCCC GGCTGCGCAC CCTGCTGATC CGGCTGGCGC TGGAACCCGG GCGGCCCGTG
CCGACCGAGT CGCTGACCCG GTCACTGTGG CCGGAGGACC GGCTCACCGA CACCTCGCAC
GCGCTGCATG CACTCGTCTC ACGGCTGCGC AGGTCACTGC CAGAGCCCGC CGTGGTGGAG
GGCATCCCAG GCGGATACCG GCTGCGGCTG CCCCCGGCAT CGGTCGACGT CACGCACTTC
GAGCAGCTGC GACAGGAGGG TCAGCGCCGG CTCCGTGAGG GCGACCCGGC GCACGCCGGC
CGGATGCTCC GGGAAGCGCT CGCCCTGTGG CGCGGCGAGC CGCTCGCCGA CGTGCGGGAC
CTGCCGTTCG CGGCGCAGGA AGTCAACCGG CTCACCGAAC TGCGGCTCAC CGCGCTGGAG
GACCGCGTCG CCGCCGACCT GGCGTGCGGC GCCGACGACC TGGTCGCGGA ACTGCAGGGG
CTGACGGCGA GCTACCCGTC CCGGGAGCGG CTGCATGCGC TGCTGGTCCG CGCCCTGCAC
GCGGAGGGCC GCCAGTCGGA GGCGCTGCGC ACCTACGCCG GCTATCGGCG CTACCTCGCT
GATCAGCTCG GCAGCGACCC TGGGCCCGAA CTGCGCGCCG CTCACCTGGC GGTGCTGCGG
GACGACCGCG GCACCGAGCG GTCCCGGGGC AACCTGGGTG CACCGCTGAC GTCGTTCGTC
GGCCGGGCCG CGGAACGCCG CCGGATCCAC GAGCAGCTGC GCGAGCAGCG CCTGGTGACG
CTGGTCGGCA CCGGCGGCGT GGGCAAGACC CGGCTGGCGA CCACGCTGGC CGCCGAACTG
GCCGACCGGA CCTCGGACGG CGTCTGGCTG ATCTCGCTGG CCACGGCAAC CGCCGCCACC
GACGTGCCGC AGACGATGCT CCACACCCTG GGGGTACGTC CCGCCGACCG GTCCGCCGAC
CCGGTACGCG CACTGGTCGC CGCGCTGGCG CCGACCGAGA CCGTGCTCAT CATGGACAAC
TGCGAGCATG TCATCGAGGC AGCGGCCCGG GTCGTCGAGC AACTTCTGGT GGGCTGCCCG
CGGCTGCGGA TCGTGGCGAC CAGCCGGGAA CCGCTGATGA TCCCGGGCGA GGCCCTGAGC
CCGGTGCCGC CGCTGCCGGT GCCGCCATCG GGGACGCCGC TGCCCAAGGC GCTGGATTCT
CCCGCGGTGC GGCTGCTCGT CGAGCGCGCC CGCGCGGCAC ACCCCGCGTT CGCCGTGACC
GAGAAGAACA TCGGGCACAT CGTGGAGACC TGCCGCCGGC TGGACGGCCT GCCGCTGGCC
ATCGAGCTGG CCGCCGCCCG GCTGCGGTCC ATGTCGATCG AGCACCTGGC CGCCCGCCTG
GACGACCGGT TCCGTCTACT CACCGGTGGC AGCCGGACCG CGCTGTCCCG TCACCAGACC
CTGCACGCCG CAGTGACCTG GAGCTGGGAC CTGCTGAGCG AGCCGGAGCG GCGGGCGCTC
CGCAGCGTGG CGGTCTTCTC GGGCTCGTTC GACGCCGCGG CGGCCGAGTC ACTCGGAGTC
GCGACGGAAC TGCTCGACGC CCTCTTCGAC CGGTCGCTCA TCACCCTGAT CGACGGCCCC
GAACCCCGCT ACGCCGTGCT GGAGACGATC CGGGAGTACG CCCTGCAGCA CCTGACCGAA
GCCGGCGAGG TGCTCCGGAT GCGACACGAC CACGCGGCAC ACTTCCTGGC GTTGGCAGAG
CAGGCGGCAC CACATCTGCG CGGCCCGCGA CAGCACCCGT GGATGCTGCG GCTCGACGCG
GAGAGCGGCA ATCTGCTGGC GGCCCTGCGC TTCGCGACCG ACTTCGGCGA CGCGGACACC
GCGGTCCGGA TGGCTGCCGC CCTCTGGTAC GCCTGGGTAG TCAACAGCGA GCACACCGAG
GCGGTCGAGC GGCTGCGCCG AGCCCTGGCG ATGCCCGGCC CGGTGCGGGC GCACGCCCGC
CGTACTGCTG CGATCGGCCT GCTCTTCAGC AGCGTCCTCG GCGGCGACCG GGAGGCAATG
CGGGACGCCC GGCGCCGGGT GCTCGACGAC GGCACACTGC CGCCGGCGGA CCCCCTGGCC
ACGGCGCTGC TGGCGGTGAC CTCCGACGAC CCCGCCCCGG TGTTCGCCGC CGACGGGCCG
GAGACCGACC CGTGGGAGCG GGGTCTGCTC TGGTGGATCA GGTCGTTCCT CAGCGCGAGG
CGGGGTGAAG CCGCCACGCT GTGCGACGCC CTCACCCGCG CCGAGGACGG ATTCCGCCGG
GCCGGGGACC GCTGGGCGCT CGCCATGTGC CTGCTGAGCA CGAGCGACGC CCGGCTGACG
GTCGGCGATC TGGACGCCAG CCTGCGTGCT CTGGAGGAGT CGACGGAACT GGCGCACGGC
TTGGGCACTA ACGACCAGCA GCGACTCTGG CTGGCGGTCG TTCGGCTGCG CAGCGCCGAC
GTCCGCGGGG CCCGCGCCGA GCTGCTGAGC ATCGTGGAGC AGGCGTCGGC CGGCCGTTAC
GCGTCCACCG CCCGGATCTT CCTGGCCGAC CTGTGCCGCC AGGAGGGCGA CTTGGACGCC
GCCGCTCGCC AGCTGGAGCA CGCCGCCAAC GACCGCGGGG CCCAGCAGGA CCGGGTTTTC
CGGTCGCTGT ACCGGTTGTC GGCCGGCCAC CTGGCCGTGG CCCGCGGCGA CCTGCGCGGC
GCGGCGCGGG ACCTGCGCGA GGGTCTGGAC CTGATCGCGG CGATGCCGCA CGTGCCGATG
GGTGCCACGG TCGGTGCCGG CGTCGCGGCC CTGCTGTTGC GTGCCGGTTC GCCGGCGTCG
GCGGCCCAGG TGCTCGGCGC CGGCCGCGCA CTGACCGGTG CGGCCAACGC CGACGTCCTG
CGCCTCGAGG AAGAGCTCGG CGAACAGCTG GGCACGAGCG GGTATGCGGA CGCCTGCCGC
CTGGAACCCC CCGCCGCCCT GGCCCTCATC CAGCAGAGTC TCGCCGCCTT CACTCCCGAC
GCTGGTAGGC GAGCACGGCC AACGGGCAGA AGATCACGAG CAGGACAGCC GACCAGATCA
AGGTCTGGGT GA
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| Protein sequence | MHVGMLGPLL VTAGGTEVRI GGARLRTLLI RLALEPGRPV PTESLTRSLW PEDRLTDTSH
ALHALVSRLR RSLPEPAVVE GIPGGYRLRL PPASVDVTHF EQLRQEGQRR LREGDPAHAG
RMLREALALW RGEPLADVRD LPFAAQEVNR LTELRLTALE DRVAADLACG ADDLVAELQG
LTASYPSRER LHALLVRALH AEGRQSEALR TYAGYRRYLA DQLGSDPGPE LRAAHLAVLR
DDRGTERSRG NLGAPLTSFV GRAAERRRIH EQLREQRLVT LVGTGGVGKT RLATTLAAEL
ADRTSDGVWL ISLATATAAT DVPQTMLHTL GVRPADRSAD PVRALVAALA PTETVLIMDN
CEHVIEAAAR VVEQLLVGCP RLRIVATSRE PLMIPGEALS PVPPLPVPPS GTPLPKALDS
PAVRLLVERA RAAHPAFAVT EKNIGHIVET CRRLDGLPLA IELAAARLRS MSIEHLAARL
DDRFRLLTGG SRTALSRHQT LHAAVTWSWD LLSEPERRAL RSVAVFSGSF DAAAAESLGV
ATELLDALFD RSLITLIDGP EPRYAVLETI REYALQHLTE AGEVLRMRHD HAAHFLALAE
QAAPHLRGPR QHPWMLRLDA ESGNLLAALR FATDFGDADT AVRMAAALWY AWVVNSEHTE
AVERLRRALA MPGPVRAHAR RTAAIGLLFS SVLGGDREAM RDARRRVLDD GTLPPADPLA
TALLAVTSDD PAPVFAADGP ETDPWERGLL WWIRSFLSAR RGEAATLCDA LTRAEDGFRR
AGDRWALAMC LLSTSDARLT VGDLDASLRA LEESTELAHG LGTNDQQRLW LAVVRLRSAD
VRGARAELLS IVEQASAGRY ASTARIFLAD LCRQEGDLDA AARQLEHAAN DRGAQQDRVF
RSLYRLSAGH LAVARGDLRG AARDLREGLD LIAAMPHVPM GATVGAGVAA LLLRAGSPAS
AAQVLGAGRA LTGAANADVL RLEEELGEQL GTSGYADACR LEPPAALALI QQSLAAFTPD
AGRRARPTGR RSRAGQPTRS RSG
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