| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_29840 |
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| Symbol | |
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| ID | 8388308 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 3221595 |
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| End bp | 3223085 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644977015 |
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| Product | DNA-binding transcriptional activator of the SARP family |
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| Protein accession | YP_003134789 |
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| Protein GI | 257056957 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3629] DNA-binding transcriptional activator of the SARP family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGGCC CGGTACAGAT CCAGATCATG GGCCCCGTCC GGGTCGTCCA GGCCGGGCGT
GAGATCTGGA CGGGAGGGGC CCGGGAACAG GCCGTTTTGG CCAGTCTCGT ACTGGACGCG
AACCGGGTCG TCAGCGTCGA CCGGTTGATC GGTGCCATCT GGGGCGGGGA ACCACCCGCC
AGCGCTCGAA GCCAGGTGGC CATCTGCGTG TCCCGGTTAC GTCGTGCGCT CAGCGTCGTG
GGACTGGACA AAGCCATCGA CACCGCCAGT CCCGGCTACC TCATCCGCCT GGACGAACAG
ACCGCGGACT GGCTTCGGTT CGGCTCCCTG ACAGCGCGGG CCGCGGCGAA AGCCGCTGCG
GGTGACCGGC TCGTCGCCGT GACGTTGCTG CGGGAAGCGT TGGGGCTGTG GCGGGGCGTG
CCGTTCGAGA ACCTGCCCGG GATGCGTGCC GAGGCGCACC GGCTGCAGGA GGCCCGGCTC
GACGCGGTGG AGACGTGTGC GGATCTGGAA CTCCAGCTCG GCAGGCACGA CCGGATCGTC
ACCGAACTGT CCGCCGTCGT GGCCGAACAG CCACTGCGGG AACGCGCCCG GGCCCAGCTC
ATGCTGGCCC AGTACCGGTC GGGGCGACGT GCCGAGGCGT TGCGGACCTA TCAGGAAGCC
CGCAGGGTGT TGGTGGAGCA GGTCGGTCTC GAACCGGGGC CCGAGCTGCG CGAGCTCCAC
GAACGGATCC TGCGGGACTC CCCCGCGTTG TCACCGGCCA CGTCGTCCCC GGCTGCGGAA
CCGATGCGCG CCACCGTGCC CTCCCAACTA CCCCGGCAGC CGATGCCCTT CGCCGGCCGT
CGCCGGGAGT TACGGGCTCT CGACGACGCA CTCGCCGACC GTCCGGACGT TCCCGGGACG
ATGGTGTTGA GCGGACCGGA GGAGGTCGGC AAGACGGCGC TCGCGCTGCA CTGGGCACAT
CAACGGCGGG AACGGTTCCC ATCCGGGCAG CTCTTCGCCA CCCTGCGGGA CGCCCGGGGT
CGGCCGGTGT CCACGTCGGT GGTCCTCGAC CGGTTCCTGC ACGCTCTCGG AGTGCCGCCG
CAGGCGGTCC CAGACGATGT GGACGGGAAA GCCGCGCTCT ACCGCAGTAC GATCGCCCGG
AAACGACTGC TCGTGGTGCT CGACGACGCC GCCGACGCGG CCCAGGTGTT GCCGCTTCTG
CCCGGATGCG CCGACTGCCG AGTGGTGATC ACCAGCCGCG ACCCGTTGCA CGACCTGGTC
GTCCGGCAGG GGGCGCGGCG GTGTGTCCTC GGACCGTTGC CGCCGGGGGA GTCGCGGGAA
CTGCTCACCC TGCTGTTGGG TGAGGACTGG TTGCATCGGC GTCCCCGGGA AGCGCTGCGC
ATCACGCAGC GGGCGGGTGG GAACCCGCTG TCGCTTCGAC GTGCCGCGGC CGGAGCCGAC
ACGTCCACGT CCCCGGTCTG CCGGGCGCAA TGGCCTACCG TGCCCGCATG A
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| Protein sequence | MTGPVQIQIM GPVRVVQAGR EIWTGGAREQ AVLASLVLDA NRVVSVDRLI GAIWGGEPPA
SARSQVAICV SRLRRALSVV GLDKAIDTAS PGYLIRLDEQ TADWLRFGSL TARAAAKAAA
GDRLVAVTLL REALGLWRGV PFENLPGMRA EAHRLQEARL DAVETCADLE LQLGRHDRIV
TELSAVVAEQ PLRERARAQL MLAQYRSGRR AEALRTYQEA RRVLVEQVGL EPGPELRELH
ERILRDSPAL SPATSSPAAE PMRATVPSQL PRQPMPFAGR RRELRALDDA LADRPDVPGT
MVLSGPEEVG KTALALHWAH QRRERFPSGQ LFATLRDARG RPVSTSVVLD RFLHALGVPP
QAVPDDVDGK AALYRSTIAR KRLLVVLDDA ADAAQVLPLL PGCADCRVVI TSRDPLHDLV
VRQGARRCVL GPLPPGESRE LLTLLLGEDW LHRRPREALR ITQRAGGNPL SLRRAAAGAD
TSTSPVCRAQ WPTVPA
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