| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_24290 |
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| Symbol | |
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| ID | 8396317 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 2689884 |
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| End bp | 2691062 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644987175 |
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| Product | DNA-binding transcriptional activator of the SARP family |
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| Protein accession | YP_003144786 |
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| Protein GI | 257065114 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3629] DNA-binding transcriptional activator of the SARP family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTGATG TGGCAGACGA GAACACGTTT CGTGCATCGT TTTTCGGGCC ATTCAGCCTT
ACGAAAGGCG ATGTGACGCT CAGTCAGTCT ACGGCCAGGT CAAAGCAGCT CATGAGGCTG
CTTTCCGCTT TGATTTACAA CAACAGCATG CCTGGACGCA ACGAGCACCT GATGGATATC
CTCTGGCCGG GTTCTACGGA CGACCCCGCC CATGCGCTTG CCAATCTCGT ATATCGCCTT
CGTAAATTGC TGGACAGGTT TTGGCCCGGC GAAGACCTCA TTGTTTCCGG CAAGGGCATC
TACTATTGGA GCCCCGACGT TCCTTTGGTT ACCGATTTCC AGACTATGCA GGATGCTGTT
GCGCGTTCAC GTGACGCAGC GGAAGAAACG GAGCGCCGAG AGTCGCTCAT GCAGGCTGTA
AGCTGCTATC GCGGTCGGTT CTTGGAGGAA TTTCCGGATG AATACGACCT GCTGCCTCGG
CAGTCGTACT ATCACAATCT GTTTCTGGGT GCCGTCAAGA ATCTGGCGGA CATATACGAT
CGCAACGGCG AATTCGAAGA TGAAGAAAGC CTGGCCCGCG CCGCGCTTGC TCTGGATCCA
TCCGACGAAG ACCTGCATTG TGCCGTGCTT CGGGCATATG CGGGAATGAA CAGGATTCTG
GATGCCGAGC GATACTACCT TGAGGCGACG GGCGTCATCA TGCAATACAC GGGCGGCGTA
CCAAGCATGC CCATGACGCA GCTGTATGAA GCCATGCTCA GTCGAATCAG CCAGCCTGAA
AACGATCTGG ACCGCATTGC CTTCGAGCTC GATCATTGCG AAGAGGTCCA GCGCGCGATG
CTCTGCGAAT ACGGCGTGTT CCGGAATATC TACGCGTTGA ACCGCAGGTT GAAAGACAGG
AACGAAGCCC CGTCTTCGAT AGTACTGGTC ACCCTTGACA CCAAGGCCGC CGACCTTGCG
CGTTCCGGCG AGGCGGTGGA CCGTTTGGAA CAGGCGATCC TTTCCAGCTT GCGACGGGGG
GATGCGGTTA CCCGGTTCAG CGGAAGCCAA TACCTGATTC TGCTCGCTGG ATGCTCCGTC
GAAAACGTGG ACATCGTGAT GAAGCGGGTT TTGCAAGCCT ATTACACGCA GGGGGCCGTG
CCGTACCGCG TGACCTACAG CGCCCGTAGT GTCGAGTAG
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| Protein sequence | MVDVADENTF RASFFGPFSL TKGDVTLSQS TARSKQLMRL LSALIYNNSM PGRNEHLMDI
LWPGSTDDPA HALANLVYRL RKLLDRFWPG EDLIVSGKGI YYWSPDVPLV TDFQTMQDAV
ARSRDAAEET ERRESLMQAV SCYRGRFLEE FPDEYDLLPR QSYYHNLFLG AVKNLADIYD
RNGEFEDEES LARAALALDP SDEDLHCAVL RAYAGMNRIL DAERYYLEAT GVIMQYTGGV
PSMPMTQLYE AMLSRISQPE NDLDRIAFEL DHCEEVQRAM LCEYGVFRNI YALNRRLKDR
NEAPSSIVLV TLDTKAADLA RSGEAVDRLE QAILSSLRRG DAVTRFSGSQ YLILLAGCSV
ENVDIVMKRV LQAYYTQGAV PYRVTYSARS VE
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