| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_1911 |
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| Symbol | |
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| ID | 8447518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 2104202 |
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| End bp | 2107174 |
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| Gene Length | 2973 bp |
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| Protein Length | 990 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 645041041 |
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| Product | transcriptional regulator domain protein |
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| Protein accession | YP_003201289 |
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| Protein GI | 258652133 |
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| COG category | [K] Transcription |
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| COG ID | [COG2909] ATP-dependent transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.345318 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.000588756 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGACCAGAC CCGTGGTGCT GACCGAGAAG CTGCGCCGCC CCGAACCGGT GGGGTTGGCC
CGGCGCCGGC TCGAGGAGCA GTTGCTCGCG CCCTCGACCA GCCGGTTGGA CCTGGTGGTG
GCGCCGCCCG GATCGGGCAA GACAACCCTG TTGGCCCGGG TGGCCGCGGC CGCCGAGAGC
GCGGGCAGTG CGGTTGGCTG GTACCGGGTG ACCGCCGACG ACGCCACCGA GTCGGCCTTC
GTGGCCCACC TGGCTCGGGC GCTGCACCTG GACACCGCCG CCGACGAGTC GTCGGTGACC
GACATGCTCG AGTTGCTCGA TCGGTCGCCG ACCGCGCCCA CCCTGGTGGT GTTCGACGAC
GTCCATGAGA TCGCCGGCTC GGTCGCCGAA CGGGCCCTGG ACCAGTTCGT GCAGCTGCGG
CCGCCGCACC TGCGGGTGCT GGTCGGTTGC CGCCGGCCCC CGGAACTGAA CATCCCGCGG
CTGCGGGTGT CCGGCCAGTT ACGCGAGATC ACCAGCGACG ACTTGCGTTT CCGCTCCTGG
GAGGTCGAGG AGCTGTTCCT GTCGGTGTTT CGGGAACCGC TCTCGCCGGA GTCGGCGGCC
GCGCTGACCC GGCGCACCGG CGGCTGGGCG GCCGGCCTGC AACTGTTCCA CCTGGCCACC
TCCGGACGCA GCGCGGTCGA CCGCGGGCGG GCCGTCGACG ACCTGGGTGG CCGGTCCAAG
CTGGTGCGCT CGTACCTGGC CCGCAACGTG TTGGCCGAGC TGCCCGAGGA ACGGCGGCAC
TTCCTGCTGC GCACGTGCAC GTTGGGCACG CTGACCGGAC CGCTGTGCGA CGCGCTGCTC
GGGGTGACCG GCAGTTCCAC CATCCTGGAC GAGCTGGAAC ACCGGCAACT GTTCACCTCC
TCCGACGACG ACGGCCACAC CTTCCGGTAC CACGAGGTGC TGCGCACGCA TCTGGAGTGG
GCCCTGGTCC AGGAGTACGG GGCGGCCGGC GCGCGCGAGT GGTACTCGCG CAGCGCCGCG
TTGTTGGAGT CGGTCGGCGA CCAGCGGGCG GCGGTGCGGG CCTACGCGCG GGCCGAGGAC
TGGGGTGCGG TCGGCCGGCT GTTGCAGACC CGCGGCACCG GCCCGGATGC CGGGGCCGCC
GGCACCGACC TGCTGCTGCC GCCGGCGGTG GTCGAGCACG ATCCGTGGTT GTCCCTGGCC
CAGGCCCGCC GCCGGGTCCG CGAGGGCGCC CTGACCGCCG CGGTCGACCG TTTCCGCCGG
GCCGAGAGCC TGCTCGACGA ACCGGATTTC CGCGACGACT GCCAGCGGGA ACGATCGGTC
GCGGCCATGT GGGCCTCGAC CGACACCACC GGCATGAGCT GGGCCGTGGA CGGGCGCGGG
TCGGCCCGGC ACTGGTCCAT CCCGATCCGC CTGGCCACCC GGCGGCTGGG CCCGGCCCGG
GTCGCTGCCC CGGCGCTGAC CGGATCGACC CCGGCGCCGC ACGAACTGGC CCGCGGCATC
ATCAGCCTGC TGGCCGGCGA CTTCCGCGAC GCCCGCCGCA CGCTGGACGC CGTCGTGGCC
GACCGGGCGG CCGAGTCGAC CCACCGGTTG CTGGCCGACC TGACCATTGC CGTCATCGAC
CTGATCCGCG ACCGCCCCGG GGATCCGGCG AGCCGGTTGG GCCAGATCGC GCTCGACGCC
GAGGTGGCCG GGTTGCCGTG GATCGCCCGG CTCGCCCGCG GGCTCGGCGA GTGCGTGCTG
GCGGCCACCG ACCCGGCCGC GTGGCGGCTG GCCGCCTGCG TCGATCAGAT CGACGAGTGT
GACGAGGCCG GCGACGCCTG GGGCGCCGCC CTGCTGACCT TGGCCGCCGC CGTCACCGGC
CTGCTGGCCG ACCCAGTGGC CGAGGCGCAT GGATTTGCCG ACGCGGCCGC GCGCTTCCGC
CGGCTGGATG CCCCGGTCCC GGCCCTGTGG GCGCAGGCGT TGCAGGCCTG CGCCCTGGCC
GGCCGGCGCC GCCCGGGCGC GGCCGAGTTG GCCGGCCGGG TGGCCACCGA GGCGCGCGCC
GCGCAGGTCA CCGGGGCCCA GGCCCTGGCC CAGATCGCCG CGGCGATGGC CGGGGCGCCG
GTCGGCACCG CGCCGGAAGC GACCGGCAGC GAACTGGACC GGATGATCGC CCTGTTCACC
GGGCCGGCCG CGCCCACCCC GCCCGTGGGT GAGCCGGCCG CCGCGACCTC CTCCATTCCC
GCGGACCAGC CGGCGCCGCT CGCCGCGAGC CGGACCGTCA CGATCCGCTG CCTGGGCGGG
TTCAGCGTCG ACATCGACGG TCAGAGCGTC GATCTGGCTC CGCTTCGGCC GCGGGCCCGC
GCGCTGCTGC GGCTGCTGGC GATGACGCCG AACCGGGACG TCCACCGCGA GCATCTGGTC
GACGCGCTGT GGCCGGGCAC GGATCTGACC GTCGGCACCC GGCGGTTGCA GGTGGCCGTG
TCCAGCGTGC GACAGCTGCT GGAACAGCGT GGCCTGCCCG GCGGCGAGGT GGTGCTGCGC
CACGGTGACG CCTACCGGCT GGCCCTGCCC CCGGGGTCGG TCGTGGACAC GGACGCCTTC
GAGCGGGGCG TGCGGGACGC CGAGACCGCC GCCGCCCGTG GTGATGTCAC CGCCGCCGCG
GCGCTGCGCG GCTCGGCCCT GTCCTGGTAC CGGGGCGACC TGCTGCCCGA GGACGGTCCG
GCCGAGCACG TGGTCGGCGA ACGCGACCGG CTCCGGCTGC TGGCCGCGAC CACGGCCGGC
ACCCTGGCCC AGGACTACCG GACGCTGGGG CAGCTGCGGC AGGCGGTGGC CGCCGCCCGG
CAGTCCGTGC AACTCGACCG CTATCAGGAC CTGGCCTGGG AGCTGCTGGC CGACCTGCAC
CGCGACGCCG GCGACGACAG CGCCGCCGCC CGCACCCGGC GCGAGCACGC CGCCGCCCAG
GCCGAACTGG AGCTGGATTC CGTGCGGCCC TGA
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| Protein sequence | MTRPVVLTEK LRRPEPVGLA RRRLEEQLLA PSTSRLDLVV APPGSGKTTL LARVAAAAES
AGSAVGWYRV TADDATESAF VAHLARALHL DTAADESSVT DMLELLDRSP TAPTLVVFDD
VHEIAGSVAE RALDQFVQLR PPHLRVLVGC RRPPELNIPR LRVSGQLREI TSDDLRFRSW
EVEELFLSVF REPLSPESAA ALTRRTGGWA AGLQLFHLAT SGRSAVDRGR AVDDLGGRSK
LVRSYLARNV LAELPEERRH FLLRTCTLGT LTGPLCDALL GVTGSSTILD ELEHRQLFTS
SDDDGHTFRY HEVLRTHLEW ALVQEYGAAG AREWYSRSAA LLESVGDQRA AVRAYARAED
WGAVGRLLQT RGTGPDAGAA GTDLLLPPAV VEHDPWLSLA QARRRVREGA LTAAVDRFRR
AESLLDEPDF RDDCQRERSV AAMWASTDTT GMSWAVDGRG SARHWSIPIR LATRRLGPAR
VAAPALTGST PAPHELARGI ISLLAGDFRD ARRTLDAVVA DRAAESTHRL LADLTIAVID
LIRDRPGDPA SRLGQIALDA EVAGLPWIAR LARGLGECVL AATDPAAWRL AACVDQIDEC
DEAGDAWGAA LLTLAAAVTG LLADPVAEAH GFADAAARFR RLDAPVPALW AQALQACALA
GRRRPGAAEL AGRVATEARA AQVTGAQALA QIAAAMAGAP VGTAPEATGS ELDRMIALFT
GPAAPTPPVG EPAAATSSIP ADQPAPLAAS RTVTIRCLGG FSVDIDGQSV DLAPLRPRAR
ALLRLLAMTP NRDVHREHLV DALWPGTDLT VGTRRLQVAV SSVRQLLEQR GLPGGEVVLR
HGDAYRLALP PGSVVDTDAF ERGVRDAETA AARGDVTAAA ALRGSALSWY RGDLLPEDGP
AEHVVGERDR LRLLAATTAG TLAQDYRTLG QLRQAVAAAR QSVQLDRYQD LAWELLADLH
RDAGDDSAAA RTRREHAAAQ AELELDSVRP
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