More than 300 homologs were found in PanDaTox collection
for query gene RSP_2599 on replicon NC_007493
Organism: Rhodobacter sphaeroides 2.4.1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007493  RSP_2599  phosphate regulon transcriptional regulator, PhoR  100 
 
 
230 aa  459  9.999999999999999e-129  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_1257  two component transcriptional regulator  100 
 
 
230 aa  459  9.999999999999999e-129  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.621627  normal 
 
 
-
 
NC_009428  Rsph17025_1924  two component transcriptional regulator  97.39 
 
 
230 aa  449  1e-125  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.781724  normal  0.399122 
 
 
-
 
NC_009952  Dshi_1538  phosphate regulon transcriptional regulatory protein  82.38 
 
 
228 aa  388  1e-107  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.280381 
 
 
-
 
NC_008044  TM1040_1257  two component transcriptional regulator  80.09 
 
 
229 aa  379  1e-104  Ruegeria sp. TM1040  Bacteria  normal  0.536699  normal 
 
 
-
 
NC_007802  Jann_2294  two component transcriptional regulator  73.13 
 
 
228 aa  339  2e-92  Jannaschia sp. CCS1  Bacteria  normal  0.305192  normal 
 
 
-
 
NC_008687  Pden_4325  two component transcriptional regulator  76.44 
 
 
229 aa  333  1e-90  Paracoccus denitrificans PD1222  Bacteria  normal  0.974523  normal 
 
 
-
 
NC_009719  Plav_0399  two component transcriptional regulator  58.04 
 
 
272 aa  277  8e-74  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.802217  normal 
 
 
-
 
NC_009720  Xaut_0202  two component transcriptional regulator  61.26 
 
 
233 aa  276  2e-73  Xanthobacter autotrophicus Py2  Bacteria  normal  0.382528  normal 
 
 
-
 
NC_007964  Nham_0640  two component transcriptional regulator  61.54 
 
 
233 aa  276  3e-73  Nitrobacter hamburgensis X14  Bacteria  normal  0.772339  n/a   
 
 
-
 
NC_012850  Rleg_0183  two component transcriptional regulator PhoB, winged helix family  62.33 
 
 
227 aa  276  3e-73  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.635675 
 
 
-
 
NC_011369  Rleg2_0173  two component transcriptional regulator PhoB, winged helix family  61.88 
 
 
227 aa  274  8e-73  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.505642  normal  0.985195 
 
 
-
 
NC_009485  BBta_1991  two component transcriptional regulator  61.09 
 
 
235 aa  274  1.0000000000000001e-72  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007406  Nwi_0511  phosphate regulon transcriptional regulatory protein phoB  61.99 
 
 
234 aa  273  2.0000000000000002e-72  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal  0.473137 
 
 
-
 
NC_011989  Avi_0485  phosphate regulon transcriptional regulatory protein PhoB  61.43 
 
 
227 aa  272  3e-72  Agrobacterium vitis S4  Bacteria  normal  0.537934  n/a   
 
 
-
 
NC_009636  Smed_0124  two component transcriptional regulator  61.88 
 
 
227 aa  272  3e-72  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.352403 
 
 
-
 
NC_008347  Mmar10_0483  two component transcriptional regulator  61.09 
 
 
229 aa  271  4.0000000000000004e-72  Maricaulis maris MCS10  Bacteria  normal  0.342081  normal 
 
 
-
 
NC_010338  Caul_4546  two component transcriptional regulator  60.54 
 
 
230 aa  271  6e-72  Caulobacter sp. K31  Bacteria  normal  normal  0.281853 
 
 
-
 
NC_007643  Rru_A0603  two component transcriptional regulator  59.73 
 
 
233 aa  271  7e-72  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.0519325  n/a   
 
 
-
 
NC_011666  Msil_0834  two component transcriptional regulator PhoB, winged helix family  59.39 
 
 
265 aa  270  1e-71  Methylocella silvestris BL2  Bacteria  n/a    normal  0.0108417 
 
 
-
 
NC_011004  Rpal_5261  two component transcriptional regulator, winged helix family  59.73 
 
 
237 aa  269  2.9999999999999997e-71  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.909356  n/a   
 
 
-
 
NC_009484  Acry_2951  two component transcriptional regulator  58.52 
 
 
236 aa  269  2.9999999999999997e-71  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_4918  two component transcriptional regulator  59.28 
 
 
234 aa  266  2e-70  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.134814 
 
 
-
 
NC_010505  Mrad2831_2339  two component transcriptional regulator  60.63 
 
 
231 aa  266  2.9999999999999995e-70  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010581  Bind_3413  two component transcriptional regulator  58.82 
 
 
252 aa  264  7e-70  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.427436 
 
 
-
 
NC_004310  BR2143  phosphate regulon transcriptional regulatory protein Phob  58.93 
 
 
228 aa  263  1e-69  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_0781  two component transcriptional regulator  58.82 
 
 
233 aa  262  3e-69  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.174075 
 
 
-
 
NC_007958  RPD_0893  winged helix family two component transcriptional regulator  58.82 
 
 
233 aa  262  3e-69  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_4718  phosphate regulon transcriptional regulatory protein PhoB  57.92 
 
 
239 aa  262  4e-69  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.220817 
 
 
-
 
NC_011757  Mchl_5185  two component transcriptional regulator PhoB, winged helix family  57.92 
 
 
234 aa  262  4e-69  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.809056 
 
 
-
 
NC_009505  BOV_2058  phosphate regulon transcriptional regulatory protein PhoB  58.93 
 
 
228 aa  261  4.999999999999999e-69  Brucella ovis ATCC 25840  Bacteria  normal  0.275433  n/a   
 
 
-
 
NC_009667  Oant_0766  two component transcriptional regulator  57.71 
 
 
228 aa  261  6.999999999999999e-69  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.0291358  n/a   
 
 
-
 
NC_008048  Sala_0821  two component transcriptional regulator  58.48 
 
 
232 aa  260  2e-68  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.60557  hitchhiker  0.00503775 
 
 
-
 
NC_010725  Mpop_5257  two component transcriptional regulator, winged helix family  57.47 
 
 
234 aa  258  5.0000000000000005e-68  Methylobacterium populi BJ001  Bacteria  normal  0.025536  normal 
 
 
-
 
NC_008254  Meso_3116  two component transcriptional regulator  57.4 
 
 
229 aa  258  7e-68  Chelativorans sp. BNC1  Bacteria  normal  0.202822  n/a   
 
 
-
 
NC_011894  Mnod_7423  two component transcriptional regulator PhoB, winged helix family  57.92 
 
 
234 aa  256  2e-67  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_6685  two component transcriptional regulator  57.47 
 
 
234 aa  255  5e-67  Methylobacterium sp. 4-46  Bacteria  normal  0.599421  normal 
 
 
-
 
NC_009511  Swit_3577  two component transcriptional regulator  58.37 
 
 
232 aa  254  9e-67  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.70324 
 
 
-
 
NC_007794  Saro_2281  two component transcriptional regulator  56.95 
 
 
229 aa  250  1e-65  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.331932  n/a   
 
 
-
 
NC_007947  Mfla_0489  two component transcriptional regulator  55.25 
 
 
228 aa  237  1e-61  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_2689  phosphate regulon transcriptional regulatory protein phoB  52.51 
 
 
229 aa  236  2e-61  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.00000627834  n/a   
 
 
-
 
NC_008345  Sfri_2768  two component transcriptional regulator, winged helix family protein  51.6 
 
 
229 aa  236  3e-61  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.0176064  n/a   
 
 
-
 
NC_003910  CPS_1208  phosphate regulon response regulator PhoB  51.14 
 
 
233 aa  235  4e-61  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_1558  phosphate regulon response regulator PhoB  52.05 
 
 
239 aa  235  4e-61  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009831  Ssed_3303  two component transcriptional regulator  52.05 
 
 
229 aa  235  4e-61  Shewanella sediminis HAW-EB3  Bacteria  unclonable  0.0000000702519  hitchhiker  0.00000106408 
 
 
-
 
NC_009438  Sputcn32_1296  two component transcriptional regulator  52.05 
 
 
229 aa  235  4e-61  Shewanella putrefaciens CN-32  Bacteria  unclonable  0.000000000460678  n/a   
 
 
-
 
NC_009665  Shew185_1364  two component transcriptional regulator  52.05 
 
 
229 aa  235  5.0000000000000005e-61  Shewanella baltica OS185  Bacteria  hitchhiker  0.0000657343  n/a   
 
 
-
 
NC_011663  Sbal223_2981  two component transcriptional regulator PhoB, winged helix family  52.05 
 
 
229 aa  235  5.0000000000000005e-61  Shewanella baltica OS223  Bacteria  hitchhiker  0.000000220801  hitchhiker  0.00121997 
 
 
-
 
NC_009997  Sbal195_1403  two component transcriptional regulator  52.05 
 
 
229 aa  235  5.0000000000000005e-61  Shewanella baltica OS195  Bacteria  hitchhiker  0.00109837  normal  0.0219543 
 
 
-
 
NC_009052  Sbal_1378  two component transcriptional regulator  52.05 
 
 
229 aa  235  5.0000000000000005e-61  Shewanella baltica OS155  Bacteria  hitchhiker  0.00000291119  n/a   
 
 
-
 
NC_013422  Hneap_2266  two component transcriptional regulator PhoB, winged helix family  52.25 
 
 
230 aa  234  6e-61  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_2709  two component transcriptional regulator  52.05 
 
 
229 aa  234  6e-61  Shewanella sp. MR-4  Bacteria  hitchhiker  0.00000407229  decreased coverage  0.000000263688 
 
 
-
 
NC_008322  Shewmr7_2777  two component transcriptional regulator  52.05 
 
 
229 aa  234  6e-61  Shewanella sp. MR-7  Bacteria  unclonable  0.000000628627  decreased coverage  0.000208697 
 
 
-
 
NC_008577  Shewana3_2879  two component transcriptional regulator  52.05 
 
 
229 aa  234  6e-61  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.000000143261  hitchhiker  0.00000615281 
 
 
-
 
NC_008700  Sama_1074  response regulator receiver protein  52.05 
 
 
229 aa  233  2.0000000000000002e-60  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.0000246777  normal  0.491091 
 
 
-
 
NC_010506  Swoo_3452  two component transcriptional regulator  51.6 
 
 
229 aa  231  5e-60  Shewanella woodyi ATCC 51908  Bacteria  hitchhiker  0.00686704  hitchhiker  0.000158375 
 
 
-
 
NC_009092  Shew_2749  two component transcriptional regulator  50.68 
 
 
241 aa  231  5e-60  Shewanella loihica PV-4  Bacteria  decreased coverage  0.00000593879  unclonable  0.00000330773 
 
 
-
 
CP001509  ECD_00347  DNA-binding response regulator in two-component regulatory system with PhoR (or CreC)  52.05 
 
 
229 aa  231  6e-60  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_3210  two component transcriptional regulator PhoB, winged helix family  52.05 
 
 
229 aa  231  6e-60  Escherichia coli DH1  Bacteria  normal  0.146413  n/a   
 
 
-
 
NC_009801  EcE24377A_0427  transcriptional regulator PhoB  52.05 
 
 
229 aa  231  6e-60  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_3234  transcriptional regulator PhoB  52.05 
 
 
229 aa  231  6e-60  Escherichia coli ATCC 8739  Bacteria  normal  0.456974  unclonable  0.00000000819474 
 
 
-
 
NC_011353  ECH74115_0475  transcriptional regulator PhoB  52.05 
 
 
229 aa  231  6e-60  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_010658  SbBS512_E0318  transcriptional regulator PhoB  52.05 
 
 
229 aa  231  6e-60  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_00351  hypothetical protein  52.05 
 
 
229 aa  231  6e-60  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_0429  transcriptional regulator PhoB  52.05 
 
 
229 aa  231  6e-60  Escherichia coli SMS-3-5  Bacteria  normal  0.283039  normal 
 
 
-
 
NC_009800  EcHS_A0467  transcriptional regulator PhoB  52.05 
 
 
229 aa  231  6e-60  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_03440  putative DNA-binding response regulator PhoB  50.45 
 
 
229 aa  231  6e-60  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_1053  two component transcriptional regulator  51.14 
 
 
229 aa  231  1e-59  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_007484  Noc_2401  phosphate regulon transcriptional regulatory protein phoB  49.55 
 
 
229 aa  230  2e-59  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_0867  transcriptional regulator PhoB  50.68 
 
 
229 aa  229  2e-59  Enterobacter sp. 638  Bacteria  normal  0.437737  normal 
 
 
-
 
NC_011205  SeD_A0435  transcriptional regulator PhoB  51.6 
 
 
229 aa  229  3e-59  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.464381  normal 
 
 
-
 
NC_011083  SeHA_C0496  transcriptional regulator PhoB  51.6 
 
 
229 aa  229  3e-59  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011094  SeSA_A0454  transcriptional regulator PhoB  51.6 
 
 
229 aa  229  3e-59  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B0435  transcriptional regulator PhoB  51.6 
 
 
229 aa  229  3e-59  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011080  SNSL254_A0441  transcriptional regulator PhoB  51.6 
 
 
229 aa  229  3e-59  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.244741  normal 
 
 
-
 
NC_008789  Hhal_0098  two component transcriptional regulator  52.97 
 
 
229 aa  229  3e-59  Halorhodospira halophila SL1  Bacteria  normal  0.761303  n/a   
 
 
-
 
NC_009901  Spea_2969  two component transcriptional regulator  50.23 
 
 
229 aa  228  5e-59  Shewanella pealeana ATCC 700345  Bacteria  decreased coverage  0.000000855765  n/a   
 
 
-
 
NC_007404  Tbd_0216  two component transcriptional regulator  52.05 
 
 
230 aa  228  7e-59  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal  0.305183 
 
 
-
 
NC_008709  Ping_2232  two component transcriptional regulator, winged helix family protein  50.68 
 
 
227 aa  228  7e-59  Psychromonas ingrahamii 37  Bacteria  normal  0.326614  normal  0.43086 
 
 
-
 
NC_009832  Spro_1041  two component transcriptional regulator  49.77 
 
 
229 aa  228  8e-59  Serratia proteamaculans 568  Bacteria  normal  normal  0.194422 
 
 
-
 
NC_009708  YpsIP31758_3136  phosphate regulon transcriptional regulatory protein PhoB  49.77 
 
 
229 aa  226  2e-58  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I2457  response regulator homolog PhoB (phosphate regulon transcriptional regulatory protein)  50.68 
 
 
230 aa  226  2e-58  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_3276  two component transcriptional regulator  49.77 
 
 
229 aa  226  2e-58  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A3286  phosphate regulon transcriptional regulatory protein  49.77 
 
 
230 aa  226  2e-58  Yersinia pestis Angola  Bacteria  normal  normal  0.0413143 
 
 
-
 
NC_011662  Tmz1t_0227  two component transcriptional regulator PhoB, winged helix family  52.05 
 
 
236 aa  226  3e-58  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A0253  DNA-binding response regulator PhoB  48.4 
 
 
229 aa  224  9e-58  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A1277  two component transcriptional regulator  49.77 
 
 
233 aa  223  2e-57  Methylibium petroleiphilum PM1  Bacteria  normal  0.0649233  normal  0.253886 
 
 
-
 
NC_013889  TK90_0959  two component transcriptional regulator PhoB, winged helix family  52.05 
 
 
229 aa  222  3e-57  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.159493 
 
 
-
 
NC_012917  PC1_1008  two component transcriptional regulator PhoB, winged helix family  48.86 
 
 
229 aa  222  4e-57  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_01026  response regulator  47.49 
 
 
229 aa  222  4e-57  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013421  Pecwa_3302  two component transcriptional regulator PhoB, winged helix family  48.86 
 
 
229 aa  222  4e-57  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_004385  phosphate regulon transcriptional regulatory protein PhoB  47.95 
 
 
229 aa  221  6e-57  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_3106  two component transcriptional regulator PhoB, winged helix family  48.86 
 
 
229 aa  221  6e-57  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_2915  two component transcriptional regulator PhoB, winged helix family  48.86 
 
 
229 aa  219  3e-56  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_010084  Bmul_2015  two component transcriptional regulator  50 
 
 
233 aa  218  3.9999999999999997e-56  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.582968  normal 
 
 
-
 
NC_010622  Bphy_0887  two component transcriptional regulator  49.56 
 
 
233 aa  219  3.9999999999999997e-56  Burkholderia phymatum STM815  Bacteria  normal  0.686184  normal  0.0397846 
 
 
-
 
NC_007347  Reut_A2162  phosphate regulon transcriptional regulatory protein phoB  49.12 
 
 
235 aa  218  5e-56  Ralstonia eutropha JMP134  Bacteria  normal  0.308703  n/a   
 
 
-
 
NC_007510  Bcep18194_A4448  two component transcriptional regulator  50 
 
 
233 aa  218  5e-56  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_1105  two component transcriptional regulator  52.05 
 
 
229 aa  218  6e-56  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.489008  normal 
 
 
-
 
NC_007908  Rfer_0578  two component transcriptional regulator  50.45 
 
 
240 aa  218  7e-56  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
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