Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4325 |
Symbol | |
ID | 4582875 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | - |
Start bp | 1505694 |
End bp | 1506383 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639771632 |
Product | two component transcriptional regulator |
Protein accession | YP_918085 |
Protein GI | 119387030 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | [TIGR02154] phosphate regulon transcriptional regulatory protein PhoB |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.974523 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCAGA CCCAACCCTG TGTCCTGGTC GTCGAGGACG AAGGCGCACA GCGCGAGGTG CTGAAATACA ACCTCGAGGC CGAGGGCTTC GACGTGGTGC TGGCCGAGAA CGGCGACGAG GCGATGCTGC TGGTCGCCGA GGAGCAGCCC GACCTGATCG TGCTGGACTG GATGCTGCCC AATGTCAGCG GCATCGAGAT CTGCCGCCGG GTCAAGGCCG ACCCCTCGAC GCGCCAGATC CCGATCATCA TGCTGTCGGC GCGCTCCGAA GAGGTGGACC GGGTGCGCGG GCTGGAGACG GGCGCGGACG ACTATGTGGT CAAGCCCTAT TCCGTGGTCG AGCTGATGGC GCGGCTGCGC ACCCAACTGC GCCGCACCCG CCCGGCCTCG ATGGGCGAAA GGCTCAGCTT TGCCGACATC ATCCTGGATG CGGGCGAGCA TCGGGTGTTC CGCGCCGGCC AGCCGGTGCA TCTGGGCCCG ACCGAGTTCC GCCTGCTTTC CACGCTGATG GAGAAGCCCG GCCGGGTCTG GACGCGCGAG CAACTGCTGG ACCGGGTCTG GGGCCGCGAC ATCTATGTCG ATACCCGCAC CATCGACGTG CATGTCGGGC GGCTGCGCAA GGCGCTGATG GCCAATGGCG GCAACAACCC GGTGCGCACG GTGCGCGGCA CCGGCTATTC GCTGGGCTGA
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Protein sequence | MAQTQPCVLV VEDEGAQREV LKYNLEAEGF DVVLAENGDE AMLLVAEEQP DLIVLDWMLP NVSGIEICRR VKADPSTRQI PIIMLSARSE EVDRVRGLET GADDYVVKPY SVVELMARLR TQLRRTRPAS MGERLSFADI ILDAGEHRVF RAGQPVHLGP TEFRLLSTLM EKPGRVWTRE QLLDRVWGRD IYVDTRTIDV HVGRLRKALM ANGGNNPVRT VRGTGYSLG
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