Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_0183 |
Symbol | |
ID | 8015409 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | + |
Start bp | 182408 |
End bp | 183091 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644822775 |
Product | two component transcriptional regulator PhoB, winged helix family |
Protein accession | YP_002974033 |
Protein GI | 241202937 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | [TIGR02154] phosphate regulon transcriptional regulatory protein PhoB |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.635675 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCCCGA GAGTTGCAGT TGTTGAAGAC GAGGAAGCCC TCAGCGTGCT TCTTCGCTAC AATCTCGAAG CGGAAGGCTT CGAGGTCGAT ACCATCCTTC GTGGCGACGA AGCCGAAATG CGGCTTCAGG AGCGCACGCC CGATCTTCTC ATCCTTGATT GGATGCTGCC CGGCGTCTCC GGCATCGAGC TCTGCCGGCG CCTGCGCATG CGGCCGGAGA CCGAGCGTCT GCCGATCATC ATGCTGACGG CGCGCGGCGA AGAGAGCGAG CGTGTCCGCG GATTGTCGAC GGGCGCCGAC GATTATGTCG TCAAGCCCTT TTCGACCCCC GAACTCGTTG CCCGCGTCAA GGCGATGCTG CGTCGCGCCC GTCCCGAGGT GCTGTCGACG GTGCTGAAAT GCGGTGACAT CGAGCTCGAC CGTGAGACCC ATCGCGTCCA TCGCAAGACC CGCGAAGTCC GCCTCGGCCC CACCGAATTC CGCCTGCTGG AATTCCTGAT GTCGTCGCCG GGCCGGGTCT TCTCCCGCTC ACAGCTGTTG GATGGTGTCT GGGGCCACGA TATCTATGTC GACGAGCGCA CCGTCGACGT CCATGTCGGC CGCCTGCGCA AGGCGCTGAA TTTCTCCAAC ATGCAGGACG TCATCCGCAC CGTCCGCGGC GCCGGTTATT CGATGGAAGC CTGA
|
Protein sequence | MIPRVAVVED EEALSVLLRY NLEAEGFEVD TILRGDEAEM RLQERTPDLL ILDWMLPGVS GIELCRRLRM RPETERLPII MLTARGEESE RVRGLSTGAD DYVVKPFSTP ELVARVKAML RRARPEVLST VLKCGDIELD RETHRVHRKT REVRLGPTEF RLLEFLMSSP GRVFSRSQLL DGVWGHDIYV DERTVDVHVG RLRKALNFSN MQDVIRTVRG AGYSMEA
|
| |