Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0124 |
Symbol | |
ID | 5320953 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 138486 |
End bp | 139169 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640789057 |
Product | two component transcriptional regulator |
Protein accession | YP_001325819 |
Protein GI | 150395352 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | [TIGR02154] phosphate regulon transcriptional regulatory protein PhoB |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.352403 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGCCGA AGATTGCCGT AGTCGAAGAC GAGGAAGCCC TGAGCGTTCT CCTGCGCTAT AATCTCGAGG CGGAAGGCTT CGAGGTTGAC ACTATCCTTC GCGGCGACGA GGCGGAAATC CGCCTGCAGG AGCGCCTGCC CGACCTTCTC ATTCTCGACT GGATGCTGCC CGGGGTTTCC GGCATCGAGC TCTGCCGCAG GCTGCGCCAG CGGCCCGAGA CGGAGCGCCT TCCGATCATC ATGCTGACGG CGCGCGGCGA GGAAAGCGAG CGCGTGCGGG GCCTTGCGAC CGGCGCCGAC GACTATGTCG TCAAACCGTT CTCGACGCCG GAACTGATGG CGAGGGTCAA GGCGATGCTC AGGCGAGCCA AGCCCGAGGT CCTGTCGACG CTCCTGCGCT GCGGCGATAT CGAGCTCGAC CGGGAGACGC ACCGGGTGCA TCGCCGCAGC CGCGAAGTGC GCCTCGGCCC GACGGAGTTC CGGCTGCTGG AATTCCTCAT GTCCTCTCCG GGACGTGTCT TCTCCCGTTC CCAGCTTCTG GACGGTGTCT GGGGGCACGA CATCTATGTC GACGAACGGA CCGTCGACGT CCATGTCGGG CGTCTGCGCA AGGCGCTGAA CTTCTCCAAT ATGCCGGATG TCATCCGCAC CGTGCGCGGC GCGGGCTACT CGTTGGAAAG CTGA
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Protein sequence | MLPKIAVVED EEALSVLLRY NLEAEGFEVD TILRGDEAEI RLQERLPDLL ILDWMLPGVS GIELCRRLRQ RPETERLPII MLTARGEESE RVRGLATGAD DYVVKPFSTP ELMARVKAML RRAKPEVLST LLRCGDIELD RETHRVHRRS REVRLGPTEF RLLEFLMSSP GRVFSRSQLL DGVWGHDIYV DERTVDVHVG RLRKALNFSN MPDVIRTVRG AGYSLES
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