| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1053 |
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| Symbol | |
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| ID | 4172839 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1258355 |
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| End bp | 1259044 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638054059 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_660633 |
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| Protein GI | 109897378 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR02154] phosphate regulon transcriptional regulatory protein PhoB |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCCAAAC GAGTATTACT GGTTGAAGAT GAAGCGCCGA TCAGGGAAAT GTTAAAATTT
GTCTTAGAGC AATCTGGCTA TGAAACGATT GAGGCAGAAG ATTTTGATGT CGCCTTGGAA
AAGGTCGTTG AGCCATACCC GGACCTTATT TTGTTGGACT GGATGTTGCC AGGTGGCAGC
GGTGTACAAC TCGCGAAGCG TTTAAAGCAA CATGAATTTA CCCGTGATAT TCCCATTATA
ATGGTAACGG CCCGGGGCGA AGAAGAAGAT AAAGTGCGTG GGCTTGATTC AGGTGCTGAT
GATTACGTGA CAAAACCATT CTCTCCCAAG GAATTGGTTG CCCGAATAAA AGCGGTTATT
CGTCGCGTTA CGCCTACATC TAGTGATGAA CTTATTGAAT TCAATGGTTT AAAACTCGAT
CCTGTTTCGC ACCGTGCGAC CGCCAATGAT GAGCCGCTTG ATATGGGCCC GACTGAATTC
AAATTACTGC ATTTCTTTAT GTCGCACTCC GAGCGGGTTT ATAGCCGTGA GCAATTACTG
GATAACGTTT GGGGTACAAA TGTATACGTG GAAGACCGTA CTGTAGATGT ACACATTCGT
CGCTTGCGCA AAGCGATATC ACGCTTTGGG CATGACAGCA TGATTCAAAC CGTTCGCGGC
TCAGGCTACC GCTTTTCAGT AAAAGTGTAA
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| Protein sequence | MAKRVLLVED EAPIREMLKF VLEQSGYETI EAEDFDVALE KVVEPYPDLI LLDWMLPGGS
GVQLAKRLKQ HEFTRDIPII MVTARGEEED KVRGLDSGAD DYVTKPFSPK ELVARIKAVI
RRVTPTSSDE LIEFNGLKLD PVSHRATAND EPLDMGPTEF KLLHFFMSHS ERVYSREQLL
DNVWGTNVYV EDRTVDVHIR RLRKAISRFG HDSMIQTVRG SGYRFSVKV
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