| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03440 |
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| Symbol | |
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| ID | 6776232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 3711641 |
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| End bp | 3712330 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642756888 |
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| Product | putative DNA-binding response regulator PhoB |
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| Protein accession | YP_002127726 |
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| Protein GI | 196158237 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR02154] phosphate regulon transcriptional regulatory protein PhoB |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCTCGTA CAGTGTTGGT GGTTGAGGAC GAAGCGCCTA TCCGTGAAAT GCTTAAGTTC
GTACTTGAGC AGTCGGGCTT TAATATTATT GAAGCCGAAG ATTATGACAT CGCGCAAGAA
AAAATTTGCG AACCCTATCC GGATTTAATC TTATTAGATT GGATGCTGCC GGGAGGAAGC
GGTGTACAGC TAGCGAAAAG TTTAAAGCAA CATGAATTTA CCCGTGATAT ACCGGTAATT
ATGCTTACCG CGCGTGGCGA AGAAGAAGAC AAAATTCGCG GCCTTGACGC AGGTGCTGAC
GATTACGTCA CCAAGCCTTT CTCTCCTAAA GAGTTAGTGG CGCGAATAAA AGCGGTCATG
CGCAGAGTAA CACCGACCTC AAACGAAGAG CCTATCGAAT TTAACGGGCT TAAGTTAGAG
CCGGTTTCCC ACCGTGTTAT GGCTAACGAA GAGCCCCTAG ACATGGGCCC AACTGAGTTC
AAGTTATTAC ACTTTTTTAT GACGCACCCA GAGCGTGTGT ACAGTCGAGA ACTTTTACTT
GATAACGTGT GGGGAACAAA CGTGTATGTA GAAGATAGAA CGGTAGACGT TCATATCCGA
CGCCTGCGCA AAGCTATCTC TCGTCATGGC CATGATGCTA TGATCCAAAC CGTACGCGGT
GCGGGCTATC GTTTTTCTAC TAAACTGTAA
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| Protein sequence | MSRTVLVVED EAPIREMLKF VLEQSGFNII EAEDYDIAQE KICEPYPDLI LLDWMLPGGS
GVQLAKSLKQ HEFTRDIPVI MLTARGEEED KIRGLDAGAD DYVTKPFSPK ELVARIKAVM
RRVTPTSNEE PIEFNGLKLE PVSHRVMANE EPLDMGPTEF KLLHFFMTHP ERVYSRELLL
DNVWGTNVYV EDRTVDVHIR RLRKAISRHG HDAMIQTVRG AGYRFSTKL
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