| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2457 |
|---|
| Symbol | phoB |
|---|
| ID | 6988973 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011312 |
|---|
| Strand | - |
|---|
| Start bp | 2629731 |
|---|
| End bp | 2630423 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 643380726 |
|---|
| Product | response regulator homolog PhoB (phosphate regulon transcriptional regulatory protein) |
|---|
| Protein accession | YP_002263810 |
|---|
| Protein GI | 209695880 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | [TIGR02154] phosphate regulon transcriptional regulatory protein PhoB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTAGAA GGATACTTGT CGTAGAAGAT GAAGCGCCAA TTCGTGAGAT GCTGTGCTTT
GTATTAGAGC AGAAAGGATA CGAACCAATT GAAGCGGAAG ATTATGATAC TGCGCTTGCT
TTACTCTGCG AACCCTACCC AGATTTAATT TTGTTGGATT GGATGTTACC TGGTGGCTCT
GGCATTAATT TAATCAAACA TCTTAAGCGT GATGAATTTA CGAAAAAGAT CCCTGTTGTG
ATGTTAACCG CTCGGGGTGA AGAAGAAGAT AAAGTGCGTG GCCTTGAAGT GGGGGCGGAT
GACTACATAA CAAAACCATT CTCACCAAAA GAATTAATGG CGCGTTTAAA AGCGGTAATT
CGTCGTGTTT CACCGACTTC TGTTGAAGAA TTAATTGATG TTCAAGGATT AAAACTTGAT
CCGGTTTCTC ATCGAGTGAC GGCAAATGAT AAGCCGTTAG ACATGGGACC AACAGAATTT
AAAATGCTGC ATTTCTTTAT GACACATCAA GAACGTGTAT ATAGTCGTGA ACAGTTATTG
AATAACGTAT GGGGCACTAA CGTCTACGTT GAAGATCGCA CTGTTGATGT TCATATTCGT
CGTCTTCGTA AAGCGCTAGA AGCAGAAGGG CATGATCGTT TGGTTCAAAC GGTTCGTGGT
GCTGGCTACC GTTTTTCTGT GCAATGCGCA TAA
|
|---|
| Protein sequence | MSRRILVVED EAPIREMLCF VLEQKGYEPI EAEDYDTALA LLCEPYPDLI LLDWMLPGGS
GINLIKHLKR DEFTKKIPVV MLTARGEEED KVRGLEVGAD DYITKPFSPK ELMARLKAVI
RRVSPTSVEE LIDVQGLKLD PVSHRVTAND KPLDMGPTEF KMLHFFMTHQ ERVYSREQLL
NNVWGTNVYV EDRTVDVHIR RLRKALEAEG HDRLVQTVRG AGYRFSVQCA
|
|---|
| |