More than 300 homologs were found in PanDaTox collection
for query gene Plav_2205 on replicon NC_009719
Organism: Parvibaculum lavamentivorans DS-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009719  Plav_2205  acyl-CoA dehydrogenase domain-containing protein  100 
 
 
397 aa  813    Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.0291092  normal 
 
 
-
 
NC_010338  Caul_1447  acyl-CoA dehydrogenase domain-containing protein  66.5 
 
 
401 aa  544  1e-153  Caulobacter sp. K31  Bacteria  normal  normal  0.0993289 
 
 
-
 
NC_008347  Mmar10_1654  acyl-CoA dehydrogenase domain-containing protein  62.56 
 
 
388 aa  497  1e-139  Maricaulis maris MCS10  Bacteria  normal  normal  0.343855 
 
 
-
 
NC_011004  Rpal_5285  acyl-CoA dehydrogenase domain protein  59.65 
 
 
394 aa  463  1e-129  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.244143  n/a   
 
 
-
 
NC_007974  Rmet_4574  acyl-CoA dehydrogenase protein  59.55 
 
 
394 aa  461  9.999999999999999e-129  Cupriavidus metallidurans CH34  Bacteria  normal  0.0289661  normal  0.010057 
 
 
-
 
NC_009485  BBta_0702  putative acyl-CoA dehydrogenase  59.15 
 
 
394 aa  460  9.999999999999999e-129  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_4675  Acyl-CoA dehydrogenase-like  58.79 
 
 
397 aa  457  1e-127  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_4384  acyl-CoA dehydrogenase-like  59.34 
 
 
398 aa  455  1e-127  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.292167  normal 
 
 
-
 
NC_007794  Saro_0999  acyl-CoA dehydrogenase-like  57.54 
 
 
386 aa  444  1e-123  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.676342  n/a   
 
 
-
 
NC_008048  Sala_3077  acyl-CoA dehydrogenase-like protein  56.03 
 
 
393 aa  434  1e-120  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_2143  acyl-CoA dehydrogenase domain-containing protein  49.63 
 
 
412 aa  400  9.999999999999999e-111  Shewanella pealeana ATCC 700345  Bacteria  normal  0.485337  n/a   
 
 
-
 
NC_009485  BBta_5149  putative acyl-CoA dehydrogenase  42.39 
 
 
393 aa  298  9e-80  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.195919  normal  0.0612186 
 
 
-
 
NC_011004  Rpal_4235  pimeloyl-CoA dehydrogenase, large subunit  41.71 
 
 
396 aa  288  1e-76  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_1749  Acyl-CoA dehydrogenase-like  41.85 
 
 
396 aa  288  1e-76  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.0172136 
 
 
-
 
NC_009074  BURPS668_1307  acyl-CoA dehydrogenase  40.49 
 
 
398 aa  288  1e-76  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_1453  putative acyl-CoA dehydrogenase family protein  40.49 
 
 
398 aa  288  2e-76  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A0720  acyl-CoA dehydrogenase domain-containing protein  40.49 
 
 
398 aa  288  2e-76  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_1316  acyl-CoA dehydrogenase  40.49 
 
 
398 aa  288  2e-76  Burkholderia pseudomallei 1106a  Bacteria  normal  0.23333  n/a   
 
 
-
 
NC_008785  BMASAVP1_A1147  acyl-CoA dehydrogenase  40.49 
 
 
398 aa  288  2e-76  Burkholderia mallei SAVP1  Bacteria  normal  0.383138  n/a   
 
 
-
 
NC_009080  BMA10247_0430  acyl-CoA dehydrogenase  40.49 
 
 
398 aa  288  2e-76  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I1078  acyl-CoA dehydrogenase domain-containing protein  40.25 
 
 
398 aa  287  2.9999999999999996e-76  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_3550  acyl-CoA dehydrogenase-like  41.6 
 
 
396 aa  287  2.9999999999999996e-76  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_2229  acyl-CoA dehydrogenase-like  41.6 
 
 
396 aa  286  5e-76  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.033637  normal  0.0664218 
 
 
-
 
NC_010508  Bcenmc03_2256  acyl-CoA dehydrogenase domain-containing protein  39.11 
 
 
398 aa  283  3.0000000000000004e-75  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_007510  Bcep18194_A5560  Acyl-CoA dehydrogenase  38.86 
 
 
398 aa  282  6.000000000000001e-75  Burkholderia sp. 383  Bacteria  normal  normal  0.198235 
 
 
-
 
NC_008060  Bcen_1620  acyl-CoA dehydrogenase-like  38.86 
 
 
398 aa  282  7.000000000000001e-75  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_2232  acyl-CoA dehydrogenase domain-containing protein  38.86 
 
 
398 aa  282  7.000000000000001e-75  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_2149  acyl-CoA dehydrogenase domain-containing protein  39.11 
 
 
398 aa  281  2e-74  Burkholderia ambifaria MC40-6  Bacteria  normal  0.324611  normal  0.360268 
 
 
-
 
NC_008390  Bamb_2270  acyl-CoA dehydrogenase domain-containing protein  39.11 
 
 
398 aa  280  2e-74  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_010084  Bmul_1045  acyl-CoA dehydrogenase domain-containing protein  38.86 
 
 
398 aa  281  2e-74  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.0868009  normal  0.228879 
 
 
-
 
NC_010511  M446_0233  pimeloyl-CoA dehydrogenase, large subunit  39.95 
 
 
400 aa  279  7e-74  Methylobacterium sp. 4-46  Bacteria  normal  0.172287  normal  0.0105147 
 
 
-
 
NC_011894  Mnod_5441  pimeloyl-CoA dehydrogenase, large subunit  40.29 
 
 
402 aa  278  1e-73  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.504048  n/a   
 
 
-
 
NC_009485  BBta_7071  putative pimeloyl-CoA dehydrogenase pimC (large subunit)  40.55 
 
 
396 aa  277  3e-73  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_1807  acyl-CoA dehydrogenase domain-containing protein  41.13 
 
 
399 aa  276  5e-73  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.167167  normal 
 
 
-
 
NC_007973  Rmet_0944  acyl-CoA dehydrogenase-like protein  39.45 
 
 
400 aa  275  9e-73  Cupriavidus metallidurans CH34  Bacteria  normal  0.671788  normal 
 
 
-
 
NC_007347  Reut_A0978  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  39.01 
 
 
400 aa  275  1.0000000000000001e-72  Ralstonia eutropha JMP134  Bacteria  normal  0.915118  n/a   
 
 
-
 
NC_007348  Reut_B3535  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  41.34 
 
 
397 aa  275  1.0000000000000001e-72  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_2048  acyl-CoA dehydrogenase domain-containing protein  40.39 
 
 
404 aa  274  2.0000000000000002e-72  Caulobacter sp. K31  Bacteria  normal  0.200153  normal 
 
 
-
 
NC_009719  Plav_1060  acyl-CoA dehydrogenase domain-containing protein  38.9 
 
 
397 aa  273  5.000000000000001e-72  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.596056  normal 
 
 
-
 
NC_010622  Bphy_1992  acyl-CoA dehydrogenase domain-containing protein  38.61 
 
 
398 aa  271  1e-71  Burkholderia phymatum STM815  Bacteria  normal  0.11361  normal  0.377898 
 
 
-
 
NC_008048  Sala_1104  acyl-CoA dehydrogenase-like protein  39.35 
 
 
397 aa  268  1e-70  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.289526  normal 
 
 
-
 
NC_012856  Rpic12D_1874  acyl-CoA dehydrogenase domain protein  37.28 
 
 
398 aa  267  2.9999999999999995e-70  Ralstonia pickettii 12D  Bacteria  normal  normal  0.400233 
 
 
-
 
NC_010682  Rpic_2197  acyl-CoA dehydrogenase domain protein  37.28 
 
 
398 aa  266  4e-70  Ralstonia pickettii 12J  Bacteria  normal  normal  0.34264 
 
 
-
 
NC_008752  Aave_4313  acyl-CoA dehydrogenase domain-containing protein  40.64 
 
 
402 aa  266  4e-70  Acidovorax citrulli AAC00-1  Bacteria  normal  0.168466  normal  0.322728 
 
 
-
 
NC_003295  RSc2045  putative acyl-CoA dehydrogenase oxidoreductase protein  36.54 
 
 
398 aa  265  8e-70  Ralstonia solanacearum GMI1000  Bacteria  normal  0.257916  normal  0.141872 
 
 
-
 
NC_007974  Rmet_3803  putative acyl-CoA dehydrogenase-like protein  41.52 
 
 
397 aa  265  1e-69  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A3192  putative pimeloyl-CoA dehydrogenase (large subunit), PimC-like  37.75 
 
 
398 aa  263  3e-69  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_1362  acyl-CoA dehydrogenase domain protein  37.75 
 
 
398 aa  263  3e-69  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0703001  decreased coverage  0.000728046 
 
 
-
 
NC_011992  Dtpsy_3018  acyl-CoA dehydrogenase domain protein  38.82 
 
 
403 aa  263  4.999999999999999e-69  Acidovorax ebreus TPSY  Bacteria  normal  0.162676  n/a   
 
 
-
 
NC_008782  Ajs_3737  acyl-CoA dehydrogenase domain-containing protein  38.82 
 
 
403 aa  262  8.999999999999999e-69  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_1065  acyl-CoA dehydrogenase domain-containing protein  38.92 
 
 
402 aa  261  2e-68  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_0842  acyl-CoA dehydrogenase domain protein  39.31 
 
 
402 aa  259  5.0000000000000005e-68  Variovorax paradoxus S110  Bacteria  normal  0.0566206  n/a   
 
 
-
 
NC_009719  Plav_0496  acyl-CoA dehydrogenase domain-containing protein  38.69 
 
 
400 aa  259  7e-68  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.954912  normal 
 
 
-
 
NC_010002  Daci_1395  acyl-CoA dehydrogenase domain-containing protein  38.75 
 
 
398 aa  259  7e-68  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_1805  acyl-CoA dehydrogenase domain-containing protein  37.47 
 
 
397 aa  258  1e-67  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.337752  normal 
 
 
-
 
NC_009484  Acry_0253  acyl-CoA dehydrogenase domain-containing protein  38.42 
 
 
403 aa  257  2e-67  Acidiphilium cryptum JF-5  Bacteria  normal  0.0424769  n/a   
 
 
-
 
NC_007908  Rfer_2593  acyl-CoA dehydrogenase-like  38.57 
 
 
402 aa  258  2e-67  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_5530  acyl-CoA dehydrogenase  39.85 
 
 
386 aa  257  2e-67  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_010333  Caul_5300  acyl-CoA dehydrogenase domain-containing protein  38.13 
 
 
402 aa  257  2e-67  Caulobacter sp. K31  Bacteria  normal  normal  0.712748 
 
 
-
 
NC_007509  Bcep18194_C7146  Acyl-CoA dehydrogenase-like  39.75 
 
 
398 aa  255  8e-67  Burkholderia sp. 383  Bacteria  normal  0.333486  normal 
 
 
-
 
NC_013440  Hoch_2702  acyl-CoA dehydrogenase domain protein  36.45 
 
 
402 aa  254  2.0000000000000002e-66  Haliangium ochraceum DSM 14365  Bacteria  normal  0.428781  normal  0.37064 
 
 
-
 
NC_010681  Bphyt_2737  acyl-CoA dehydrogenase domain protein  38.42 
 
 
402 aa  254  2.0000000000000002e-66  Burkholderia phytofirmans PsJN  Bacteria  normal  0.944571  normal 
 
 
-
 
NC_009719  Plav_0499  acyl-CoA dehydrogenase domain-containing protein  38.54 
 
 
452 aa  253  3e-66  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.504662  normal 
 
 
-
 
NC_010512  Bcenmc03_6851  acyl-CoA dehydrogenase domain-containing protein  38.81 
 
 
399 aa  253  3e-66  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_007950  Bpro_5277  acyl-CoA dehydrogenase-like  37.5 
 
 
389 aa  251  2e-65  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_008228  Patl_0105  acyl-CoA dehydrogenase-like  37.12 
 
 
396 aa  251  2e-65  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_4958  acyl-CoA dehydrogenase domain-containing protein  38.31 
 
 
397 aa  251  2e-65  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A1390  putative acyl-CoA dehydrogenase  37.93 
 
 
416 aa  249  4e-65  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.342556 
 
 
-
 
NC_008060  Bcen_2264  acyl-CoA dehydrogenase-like  37.44 
 
 
402 aa  249  4e-65  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.0525732  n/a   
 
 
-
 
NC_008390  Bamb_2933  acyl-CoA dehydrogenase domain-containing protein  37.31 
 
 
398 aa  250  4e-65  Burkholderia ambifaria AMMD  Bacteria  normal  0.26502  n/a   
 
 
-
 
NC_008542  Bcen2424_2878  acyl-CoA dehydrogenase domain-containing protein  37.44 
 
 
402 aa  249  4e-65  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_2008  acyl-CoA dehydrogenase domain-containing protein  37.88 
 
 
833 aa  249  8e-65  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.773218 
 
 
-
 
NC_010002  Daci_5374  acyl-CoA dehydrogenase domain-containing protein  35.82 
 
 
393 aa  248  1e-64  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.988839 
 
 
-
 
NC_010551  BamMC406_2795  acyl-CoA dehydrogenase domain-containing protein  37.31 
 
 
398 aa  248  1e-64  Burkholderia ambifaria MC40-6  Bacteria  normal  0.174567  normal 
 
 
-
 
NC_010508  Bcenmc03_2889  acyl-CoA dehydrogenase domain-containing protein  37.19 
 
 
402 aa  248  2e-64  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.222228  normal 
 
 
-
 
NC_009656  PSPA7_4361  acyl-CoA dehydrogenase  36.9 
 
 
381 aa  248  2e-64  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_1314  acyl-CoA dehydrogenase domain protein  37.53 
 
 
775 aa  247  3e-64  Variovorax paradoxus S110  Bacteria  normal  0.788879  n/a   
 
 
-
 
NC_010676  Bphyt_5104  acyl-CoA dehydrogenase domain protein  39.51 
 
 
399 aa  247  3e-64  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_1060  acyl-CoA dehydrogenase domain-containing protein  37.38 
 
 
398 aa  246  4e-64  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_008347  Mmar10_2529  acyl-CoA dehydrogenase domain-containing protein  38 
 
 
393 aa  246  4e-64  Maricaulis maris MCS10  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_1429  acyl-CoA dehydrogenase domain protein  36.82 
 
 
398 aa  244  1.9999999999999999e-63  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_2104  acyl-CoA dehydrogenase domain-containing protein  36.39 
 
 
393 aa  244  1.9999999999999999e-63  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_51100  acyl-CoA dehydrogenase  37.72 
 
 
381 aa  244  1.9999999999999999e-63  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.28895  decreased coverage  0.000000076859 
 
 
-
 
NC_008752  Aave_3439  acyl-CoA dehydrogenase domain-containing protein  36.5 
 
 
401 aa  243  3e-63  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.154359 
 
 
-
 
NC_009719  Plav_1872  acyl-CoA dehydrogenase domain-containing protein  36.82 
 
 
397 aa  243  3.9999999999999997e-63  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.364161 
 
 
-
 
NC_012791  Vapar_1274  acyl-CoA dehydrogenase domain protein  36.48 
 
 
393 aa  243  3.9999999999999997e-63  Variovorax paradoxus S110  Bacteria  normal  0.409233  n/a   
 
 
-
 
NC_007778  RPB_1238  Acyl-CoA dehydrogenase-like  36.32 
 
 
398 aa  243  5e-63  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_2018  acyl-CoA dehydrogenase domain-containing protein  36.39 
 
 
411 aa  243  5e-63  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.642987 
 
 
-
 
NC_007348  Reut_B4559  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  38 
 
 
382 aa  243  6e-63  Ralstonia eutropha JMP134  Bacteria  normal  0.308203  n/a   
 
 
-
 
NC_007348  Reut_B4790  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  36.88 
 
 
395 aa  242  7e-63  Ralstonia eutropha JMP134  Bacteria  normal  0.103572  n/a   
 
 
-
 
NC_013510  Tcur_3342  acyl-CoA dehydrogenase domain protein  37.84 
 
 
393 aa  242  9e-63  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_010512  Bcenmc03_6856  acyl-CoA dehydrogenase domain-containing protein  37.04 
 
 
402 aa  241  2e-62  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_3727  putative acyl-CoA dehydrogenase  37.38 
 
 
399 aa  240  2.9999999999999997e-62  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_4007  acyl-CoA dehydrogenase-like  36.07 
 
 
398 aa  239  5e-62  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007510  Bcep18194_A6220  Acyl-CoA dehydrogenase  37.19 
 
 
402 aa  238  1e-61  Burkholderia sp. 383  Bacteria  decreased coverage  0.0082466  normal 
 
 
-
 
NC_009511  Swit_0317  acyl-CoA dehydrogenase domain-containing protein  37.97 
 
 
386 aa  238  1e-61  Sphingomonas wittichii RW1  Bacteria  normal  0.410084  normal 
 
 
-
 
NC_011992  Dtpsy_2731  acyl-CoA dehydrogenase domain protein  35.82 
 
 
393 aa  238  1e-61  Acidovorax ebreus TPSY  Bacteria  normal  0.572284  n/a   
 
 
-
 
NC_007651  BTH_I0394  acyl-CoA dehydrogenase domain-containing protein  37.99 
 
 
403 aa  238  2e-61  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_010084  Bmul_0425  acyl-CoA dehydrogenase domain-containing protein  38.12 
 
 
400 aa  238  2e-61  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.735968  normal  0.979961 
 
 
-
 
NC_008726  Mvan_4379  acyl-CoA dehydrogenase domain-containing protein  38.07 
 
 
385 aa  236  4e-61  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.627573  normal 
 
 
-
 
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