Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_5300 |
Symbol | |
ID | 5897210 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010333 |
Strand | - |
Start bp | 10074 |
End bp | 11282 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641550593 |
Product | acyl-CoA dehydrogenase domain-containing protein |
Protein accession | YP_001672079 |
Protein GI | 167621571 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.712748 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCTCA CCTACAGCGC CGAACACCAG GCTTTTCGGC GCGAAGTGCT CGTCTTTCTT GAGGCCCACC GCCATGCCGC CCCCAAGGGC GGCGGGGCTG CGCAGCGGCC CTCAGCAGAA GCGGTAGCCT GGCAGAAACT GTTGATCGCC CATGGTTACG CCGCGCGGAC CATCCCGAAG GAATATGGAG GGTATGGGGC CGCGCCGGAC ATCCTGAAGT CCCGCATCAT CGGCGAGGAA TTCGCCCGGA CCGGCGTCCC ACCGGGGCTA CAGAGCCAGG GCATTTCGAT GCTGGTTCCG ACGCTGTTGG AGCTGGGGAC GGAAGATCAG AAGCGCCAGT GGATCGGGCC GACGATCCAC GGCGAGGTTA TCTGGTGTCA GGGATACTCC GAGCCGGGCT CGGGGTCCGA CCTCGCCAGC CTTCAGACGC GCGCAACGGA GGATGGCGAC GACTTCGTCA TTAATGGCCA GAAGATCTGG ACCAGCACGG CCCGCGAGGC TGACATGATC TTCTGCCTCG TGCGCACCGA GCCGGACAAG GGAAAGCACG ACGGAATCAG CTATCTGATC TTTTCGATGA AAACGCCGGG GATCGAGGTT CGCCCCCTGG TGACCATGAC CGGGCACGCC GAGTTCAACG AGACCTTCTT CACCGACGTG CGCGTCCCGA AGTCCCAGAT CGTGGGAAAG CGCGGGCAGG GCTGGTTCGT CGCCAACGCC ACCCTCAAGC ACGAACGCGG AATGCTGGGG GACCCGGGCC AGCTCGAAAG CCGCTTCCTT GCCTTGGCGG AGCTGATGCG GACTGAGACA GCCGGCGATG GCCGGATCAT GGACAACCCG ATCCTGCGAG ATCGTCTGCT GCGGCTGCAG GCGGAACTCG CGGCGATGAA ATTCAATGGG CTTCGCGTGC TGAGCGCCTC GGCGAACGGC GGCGAAGCGG GGCTCGCGCG GCTGATCGTC AAGCTACAGT CCTGCGAGCT GGCCCACCAG ATATCGGCGC TGGCGATCGA CGCCCTTGGC GAGCTCGGCG TGCTCTACGA CGGCAGCCCG CACCTGCGCT CCCACGGCAG CTGGCAGCAG GCCTACATGT TCCAGCTTGG CCTGATCATC GGCGGGGGCA CCGCGCAGAT CCAGAAGAAC ATCATCGCCG AACGGGGGCT CGGCATGCCG CGTGAGCCGA AGCCCACCAC GGAAGGGAGC CGCTCCTAA
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Protein sequence | MDLTYSAEHQ AFRREVLVFL EAHRHAAPKG GGAAQRPSAE AVAWQKLLIA HGYAARTIPK EYGGYGAAPD ILKSRIIGEE FARTGVPPGL QSQGISMLVP TLLELGTEDQ KRQWIGPTIH GEVIWCQGYS EPGSGSDLAS LQTRATEDGD DFVINGQKIW TSTAREADMI FCLVRTEPDK GKHDGISYLI FSMKTPGIEV RPLVTMTGHA EFNETFFTDV RVPKSQIVGK RGQGWFVANA TLKHERGMLG DPGQLESRFL ALAELMRTET AGDGRIMDNP ILRDRLLRLQ AELAAMKFNG LRVLSASANG GEAGLARLIV KLQSCELAHQ ISALAIDALG ELGVLYDGSP HLRSHGSWQQ AYMFQLGLII GGGTAQIQKN IIAERGLGMP REPKPTTEGS RS
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