Gene Caul_5300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_5300 
Symbol 
ID5897210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010333 
Strand
Start bp10074 
End bp11282 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content65% 
IMG OID641550593 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_001672079 
Protein GI167621571 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.712748 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCTCA CCTACAGCGC CGAACACCAG GCTTTTCGGC GCGAAGTGCT CGTCTTTCTT 
GAGGCCCACC GCCATGCCGC CCCCAAGGGC GGCGGGGCTG CGCAGCGGCC CTCAGCAGAA
GCGGTAGCCT GGCAGAAACT GTTGATCGCC CATGGTTACG CCGCGCGGAC CATCCCGAAG
GAATATGGAG GGTATGGGGC CGCGCCGGAC ATCCTGAAGT CCCGCATCAT CGGCGAGGAA
TTCGCCCGGA CCGGCGTCCC ACCGGGGCTA CAGAGCCAGG GCATTTCGAT GCTGGTTCCG
ACGCTGTTGG AGCTGGGGAC GGAAGATCAG AAGCGCCAGT GGATCGGGCC GACGATCCAC
GGCGAGGTTA TCTGGTGTCA GGGATACTCC GAGCCGGGCT CGGGGTCCGA CCTCGCCAGC
CTTCAGACGC GCGCAACGGA GGATGGCGAC GACTTCGTCA TTAATGGCCA GAAGATCTGG
ACCAGCACGG CCCGCGAGGC TGACATGATC TTCTGCCTCG TGCGCACCGA GCCGGACAAG
GGAAAGCACG ACGGAATCAG CTATCTGATC TTTTCGATGA AAACGCCGGG GATCGAGGTT
CGCCCCCTGG TGACCATGAC CGGGCACGCC GAGTTCAACG AGACCTTCTT CACCGACGTG
CGCGTCCCGA AGTCCCAGAT CGTGGGAAAG CGCGGGCAGG GCTGGTTCGT CGCCAACGCC
ACCCTCAAGC ACGAACGCGG AATGCTGGGG GACCCGGGCC AGCTCGAAAG CCGCTTCCTT
GCCTTGGCGG AGCTGATGCG GACTGAGACA GCCGGCGATG GCCGGATCAT GGACAACCCG
ATCCTGCGAG ATCGTCTGCT GCGGCTGCAG GCGGAACTCG CGGCGATGAA ATTCAATGGG
CTTCGCGTGC TGAGCGCCTC GGCGAACGGC GGCGAAGCGG GGCTCGCGCG GCTGATCGTC
AAGCTACAGT CCTGCGAGCT GGCCCACCAG ATATCGGCGC TGGCGATCGA CGCCCTTGGC
GAGCTCGGCG TGCTCTACGA CGGCAGCCCG CACCTGCGCT CCCACGGCAG CTGGCAGCAG
GCCTACATGT TCCAGCTTGG CCTGATCATC GGCGGGGGCA CCGCGCAGAT CCAGAAGAAC
ATCATCGCCG AACGGGGGCT CGGCATGCCG CGTGAGCCGA AGCCCACCAC GGAAGGGAGC
CGCTCCTAA
 
Protein sequence
MDLTYSAEHQ AFRREVLVFL EAHRHAAPKG GGAAQRPSAE AVAWQKLLIA HGYAARTIPK 
EYGGYGAAPD ILKSRIIGEE FARTGVPPGL QSQGISMLVP TLLELGTEDQ KRQWIGPTIH
GEVIWCQGYS EPGSGSDLAS LQTRATEDGD DFVINGQKIW TSTAREADMI FCLVRTEPDK
GKHDGISYLI FSMKTPGIEV RPLVTMTGHA EFNETFFTDV RVPKSQIVGK RGQGWFVANA
TLKHERGMLG DPGQLESRFL ALAELMRTET AGDGRIMDNP ILRDRLLRLQ AELAAMKFNG
LRVLSASANG GEAGLARLIV KLQSCELAHQ ISALAIDALG ELGVLYDGSP HLRSHGSWQQ
AYMFQLGLII GGGTAQIQKN IIAERGLGMP REPKPTTEGS RS