More than 300 homologs were found in PanDaTox collection
for query gene Msil_3593 on replicon NC_011666
Organism: Methylocella silvestris BL2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011666  Msil_3593  acyl-CoA dehydrogenase domain protein  100 
 
 
385 aa  755    Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_010725  Mpop_0138  cyclic nucleotide-binding protein  56.32 
 
 
382 aa  352  5.9999999999999994e-96  Methylobacterium populi BJ001  Bacteria  normal  0.363055  normal  0.0562136 
 
 
-
 
NC_010505  Mrad2831_3329  acyl-CoA dehydrogenase type 2  55.56 
 
 
382 aa  343  4e-93  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.684525  normal 
 
 
-
 
NC_010725  Mpop_4305  Acyl-CoA dehydrogenase type 2 domain  50.39 
 
 
412 aa  298  2e-79  Methylobacterium populi BJ001  Bacteria  normal  0.0499711  normal 
 
 
-
 
NC_010172  Mext_3848  acyl-CoA dehydrogenase type 2  49.86 
 
 
391 aa  295  9e-79  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.680066 
 
 
-
 
NC_011757  Mchl_4157  Acyl-CoA dehydrogenase type 2 domain  49.58 
 
 
391 aa  292  5e-78  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0737881  normal 
 
 
-
 
NC_007778  RPB_4098  acyl-CoA dehydrogenase  43.43 
 
 
373 aa  267  2e-70  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.461592  normal  0.148654 
 
 
-
 
NC_007958  RPD_0575  Acyl-CoA dehydrogenase  45.54 
 
 
322 aa  264  2e-69  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_2922  Acyl-CoA dehydrogenase type 2 domain protein  37.99 
 
 
391 aa  230  3e-59  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_011365  Gdia_0796  Acyl-CoA dehydrogenase-like protein  43.06 
 
 
381 aa  224  2e-57  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.585612  normal  0.628725 
 
 
-
 
NC_010002  Daci_5871  putative acyl-CoA dehydrogenase-related protein  33.1 
 
 
363 aa  96.3  7e-19  Delftia acidovorans SPH-1  Bacteria  normal  0.845489  normal  0.406047 
 
 
-
 
NC_002947  PP_3259  acyl-CoA dehydrogenase-related protein  29.75 
 
 
347 aa  91.7  2e-17  Pseudomonas putida KT2440  Bacteria  normal  0.543921  normal 
 
 
-
 
NC_009512  Pput_2502  hypothetical protein  29.75 
 
 
347 aa  90.5  4e-17  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_2543  hypothetical protein  29.62 
 
 
332 aa  90.1  6e-17  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.730703 
 
 
-
 
NC_004578  PSPTO_3131  hypothetical protein  28.93 
 
 
337 aa  87.8  3e-16  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.470644  n/a   
 
 
-
 
NC_007951  Bxe_A2027  putative acyl-CoA dehydrogenase-related protein  31.56 
 
 
335 aa  86.3  8e-16  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_2636  acyl-CoA dehydrogenase  29.58 
 
 
347 aa  86.3  8e-16  Pseudomonas putida GB-1  Bacteria  normal  0.292935  normal  0.528602 
 
 
-
 
NC_007005  Psyr_2998  hypothetical protein  31.25 
 
 
337 aa  84.7  0.000000000000003  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_2240  putative acyl-CoA dehydrogenase-related protein  31.96 
 
 
392 aa  84  0.000000000000004  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_5416  putative acyl-CoA dehydrogenase-related protein  28.11 
 
 
388 aa  83.6  0.000000000000006  Burkholderia phymatum STM815  Bacteria  normal  normal  0.699876 
 
 
-
 
NC_011885  Cyan7425_0063  Acyl-CoA dehydrogenase type 2 domain protein  23.06 
 
 
401 aa  78.6  0.0000000000002  Cyanothece sp. PCC 7425  Bacteria  n/a    normal 
 
 
-
 
NC_010501  PputW619_2652  acyl-CoA dehydrogenase  29.53 
 
 
347 aa  77.4  0.0000000000004  Pseudomonas putida W619  Bacteria  normal  0.530272  normal  0.685897 
 
 
-
 
NC_009620  Smed_4516  acyl-CoA dehydrogenase type 2  25.87 
 
 
395 aa  75.1  0.000000000002  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.130533 
 
 
-
 
NC_009953  Sare_4695  acyl-CoA dehydrogenase type 2  29.89 
 
 
387 aa  74.3  0.000000000003  Salinispora arenicola CNS-205  Bacteria  normal  0.46169  normal  0.258533 
 
 
-
 
NC_013205  Aaci_2056  acyl-CoA dehydrogenase domain protein  26.27 
 
 
377 aa  72.8  0.000000000009  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.232194  n/a   
 
 
-
 
NC_008148  Rxyl_1346  hypothetical protein  29.23 
 
 
364 aa  72.4  0.00000000001  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.0806475  n/a   
 
 
-
 
NC_011988  Avi_5156  acyl-CoA dehydrogenase  25.76 
 
 
420 aa  71.6  0.00000000002  Agrobacterium vitis S4  Bacteria  normal  0.0718281  n/a   
 
 
-
 
NC_009523  RoseRS_0319  acyl-CoA dehydrogenase domain-containing protein  26.27 
 
 
383 aa  71.6  0.00000000002  Roseiflexus sp. RS-1  Bacteria  normal  0.339666  normal  0.0442463 
 
 
-
 
NC_010501  PputW619_4989  acyl-CoA dehydrogenase type 2  26.61 
 
 
393 aa  71.2  0.00000000003  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_0223  DszC family monooxygenase  26.82 
 
 
406 aa  70.9  0.00000000004  Pseudomonas putida KT2440  Bacteria  decreased coverage  0.00885592  hitchhiker  0.00679283 
 
 
-
 
NC_009512  Pput_0238  acyl-CoA dehydrogenase type 2  26.82 
 
 
393 aa  70.9  0.00000000004  Pseudomonas putida F1  Bacteria  normal  0.679999  normal  0.247147 
 
 
-
 
NC_013946  Mrub_0264  acyl-CoA dehydrogenase domain-containing protein  25.28 
 
 
394 aa  70.5  0.00000000005  Meiothermus ruber DSM 1279  Bacteria  normal  0.0644181  normal  0.99067 
 
 
-
 
NC_013093  Amir_2567  putative acyl-CoA dehydrogenase-related protein  30.3 
 
 
359 aa  70.5  0.00000000005  Actinosynnema mirum DSM 43827  Bacteria  normal  0.752192  n/a   
 
 
-
 
NC_007969  Pcryo_1801  putative acyl-CoA dehydrogenase-related protein  25.36 
 
 
362 aa  70.1  0.00000000006  Psychrobacter cryohalolentis K5  Bacteria  normal  normal  0.162926 
 
 
-
 
NC_009380  Strop_4265  acyl-CoA dehydrogenase type 2  29.27 
 
 
387 aa  69.7  0.00000000009  Salinispora tropica CNB-440  Bacteria  normal  normal  0.184931 
 
 
-
 
NC_007492  Pfl01_0239  Acyl-CoA dehydrogenase-like  25.53 
 
 
397 aa  69.3  0.0000000001  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_31490  Acyl-CoA dehydrogenase family protein  28.1 
 
 
402 aa  68.6  0.0000000002  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_013202  Hmuk_3108  acyl-CoA dehydrogenase domain protein  24.07 
 
 
380 aa  68.9  0.0000000002  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal 
 
 
-
 
NC_007650  BTH_II1742  acyl-CoA dehydrogenase domain-containing protein  26.11 
 
 
412 aa  68.6  0.0000000002  Burkholderia thailandensis E264  Bacteria  normal  0.469598  n/a   
 
 
-
 
NC_010322  PputGB1_0247  acyl-CoA dehydrogenase type 2  26.15 
 
 
393 aa  68.6  0.0000000002  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_3488  Acyl-CoA dehydrogenase, type 2-like protein  30.77 
 
 
411 aa  68.2  0.0000000002  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_3551  acyl-CoA dehydrogenase type 2  30.77 
 
 
411 aa  68.2  0.0000000002  Mycobacterium sp. KMS  Bacteria  normal  0.058709  normal 
 
 
-
 
NC_009077  Mjls_3501  acyl-CoA dehydrogenase type 2  30.77 
 
 
411 aa  68.2  0.0000000002  Mycobacterium sp. JLS  Bacteria  normal  0.102842  normal  0.83486 
 
 
-
 
NC_013510  Tcur_1377  acyl-CoA dehydrogenase domain protein  29.73 
 
 
409 aa  68.2  0.0000000003  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0469267  n/a   
 
 
-
 
NC_007952  Bxe_B1544  hypothetical protein  27.09 
 
 
420 aa  67.8  0.0000000004  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.86549 
 
 
-
 
NC_009656  PSPA7_2915  hypothetical protein  27.4 
 
 
405 aa  67  0.0000000005  Pseudomonas aeruginosa PA7  Bacteria  normal  0.281087  n/a   
 
 
-
 
NC_011371  Rleg2_6564  Acyl-CoA dehydrogenase type 2 domain  28.57 
 
 
402 aa  67  0.0000000005  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.82838  normal  0.227478 
 
 
-
 
NC_004578  PSPTO_5185  acyl-CoA dehydrogenase family protein  24.89 
 
 
401 aa  66.6  0.0000000006  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_34300  DszC family monooxygenase  27.85 
 
 
405 aa  67  0.0000000006  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.803163  normal  0.0145718 
 
 
-
 
NC_007005  Psyr_0353  Acyl-CoA dehydrogenase, C-terminal  25.45 
 
 
401 aa  66.2  0.0000000008  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.758482 
 
 
-
 
NC_009485  BBta_2551  putative acyl-CoA dehydrogenase  28.49 
 
 
416 aa  66.2  0.0000000008  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.285917  normal  0.436959 
 
 
-
 
NC_011371  Rleg2_6565  Acyl-CoA dehydrogenase type 2 domain  25 
 
 
405 aa  66.2  0.0000000009  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.191589  normal  0.316976 
 
 
-
 
NC_010338  Caul_2948  acyl-CoA dehydrogenase domain-containing protein  29.21 
 
 
416 aa  65.9  0.000000001  Caulobacter sp. K31  Bacteria  normal  0.0471344  normal 
 
 
-
 
NC_009767  Rcas_0249  acyl-CoA dehydrogenase domain-containing protein  25.89 
 
 
383 aa  65.5  0.000000001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.538468  normal  0.417839 
 
 
-
 
NC_013124  Afer_0732  acyl-CoA dehydrogenase domain protein  26.92 
 
 
379 aa  66.2  0.000000001  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_3620  acyl-CoA dehydrogenase domain-containing protein  27 
 
 
397 aa  65.1  0.000000002  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_4897  acyl-CoA dehydrogenase domain protein  30.41 
 
 
381 aa  65.1  0.000000002  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_2677  Acyl-CoA dehydrogenase type 2 domain protein  26.89 
 
 
433 aa  64.7  0.000000003  Conexibacter woesei DSM 14684  Bacteria  normal  0.3001  normal  0.883174 
 
 
-
 
NC_014150  Bmur_1546  acyl-CoA dehydrogenase domain protein  23.3 
 
 
381 aa  63.9  0.000000005  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_34550  hypothetical protein  28.49 
 
 
411 aa  63.9  0.000000005  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.0698049 
 
 
-
 
NC_012852  Rleg_6150  Acyl-CoA dehydrogenase type 2 domain protein  25.19 
 
 
405 aa  63.5  0.000000005  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  hitchhiker  0.00426369  hitchhiker  0.00144914 
 
 
-
 
NC_008835  BMA10229_0091  acyl-CoA dehydrogenase domain-containing protein  25.93 
 
 
412 aa  63.5  0.000000006  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A0928  acyl-CoA dehydrogenase domain-containing protein  25.93 
 
 
412 aa  63.5  0.000000006  Burkholderia pseudomallei 1106a  Bacteria  normal  0.0398526  n/a   
 
 
-
 
NC_009079  BMA10247_A1523  acyl-CoA dehydrogenase domain-containing protein  25.93 
 
 
412 aa  63.5  0.000000006  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_006349  BMAA1148  acyl-CoA dehydrogenase domain-containing protein  25.93 
 
 
412 aa  63.5  0.000000006  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A2254  acyl-CoA dehydrogenase domain-containing protein  25.93 
 
 
451 aa  63.5  0.000000006  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A1013  acyl-CoA dehydrogenase domain-containing protein  25.93 
 
 
412 aa  63.5  0.000000006  Burkholderia pseudomallei 668  Bacteria  normal  0.153934  n/a   
 
 
-
 
NC_010505  Mrad2831_4228  acyl-CoA dehydrogenase type 2  27.69 
 
 
412 aa  63.2  0.000000008  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.0568392 
 
 
-
 
NC_009439  Pmen_2362  acyl-CoA dehydrogenase type 2  27.23 
 
 
399 aa  63.2  0.000000008  Pseudomonas mendocina ymp  Bacteria  decreased coverage  0.00266653  hitchhiker  0.00112869 
 
 
-
 
NC_009485  BBta_4293  putative Acyl-CoA dehydrogenase  27.61 
 
 
398 aa  63.2  0.000000008  Bradyrhizobium sp. BTAi1  Bacteria  normal  hitchhiker  0.004124 
 
 
-
 
NC_010002  Daci_1778  acyl-CoA dehydrogenase type 2  26.67 
 
 
425 aa  62.8  0.000000009  Delftia acidovorans SPH-1  Bacteria  normal  0.251662  normal  0.768767 
 
 
-
 
NC_013441  Gbro_0202  hypothetical protein  31.87 
 
 
333 aa  62.8  0.00000001  Gordonia bronchialis DSM 43247  Bacteria  normal  0.499323  n/a   
 
 
-
 
NC_009338  Mflv_4370  acyl-CoA dehydrogenase domain-containing protein  26.43 
 
 
404 aa  62.4  0.00000001  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_2439  acyl-CoA dehydrogenase domain protein  23.05 
 
 
380 aa  62.8  0.00000001  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009674  Bcer98_3863  acyl-CoA dehydrogenase domain-containing protein  24.26 
 
 
376 aa  62.8  0.00000001  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_0545  acyl-CoA dehydrogenase domain protein  28.17 
 
 
382 aa  62  0.00000002  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_3157  acyl-CoA dehydrogenase type 2  26.95 
 
 
407 aa  62  0.00000002  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B1545  hypothetical protein  25.58 
 
 
416 aa  62  0.00000002  Burkholderia xenovorans LB400  Bacteria  normal  0.828601  normal  0.5845 
 
 
-
 
NC_013947  Snas_0146  Acyl-CoA dehydrogenase type 2 domain-containing protein  26.58 
 
 
382 aa  62  0.00000002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.658373 
 
 
-
 
NC_012880  Dd703_3100  Acyl-CoA dehydrogenase type 2 domain protein  25.57 
 
 
392 aa  62  0.00000002  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_013169  Ksed_08210  butyryl-CoA dehydrogenase  23.71 
 
 
394 aa  62  0.00000002  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal  0.249284 
 
 
-
 
NC_012793  GWCH70_3342  acyl-CoA dehydrogenase domain protein  24.32 
 
 
379 aa  61.6  0.00000002  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013204  Elen_1834  crotonobetainyl-CoA dehydrogenase  25.52 
 
 
383 aa  62  0.00000002  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_2934  hypothetical protein  27.96 
 
 
411 aa  61.2  0.00000003  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_1370  Acyl-CoA dehydrogenase type 2 domain protein  28 
 
 
413 aa  60.8  0.00000003  Thermomonospora curvata DSM 43183  Bacteria  normal  0.478253  n/a   
 
 
-
 
NC_010682  Rpic_0695  Acyl-CoA dehydrogenase type 2 domain  29.3 
 
 
390 aa  61.2  0.00000003  Ralstonia pickettii 12J  Bacteria  normal  0.801723  normal  0.240956 
 
 
-
 
NC_003909  BCE_5473  acyl-CoA dehydrogenase  25.44 
 
 
376 aa  60.8  0.00000004  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_2684  putative acyl-CoA dehydrogenase  25.83 
 
 
375 aa  60.8  0.00000004  Pseudomonas aeruginosa PA7  Bacteria  normal  0.126402  n/a   
 
 
-
 
NC_012793  GWCH70_1843  acyl-CoA dehydrogenase domain protein  23.28 
 
 
380 aa  60.8  0.00000004  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_008062  Bcen_6515  Acyl-CoA dehydrogenase, type 2-like  26.87 
 
 
412 aa  60.8  0.00000004  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A5520  acyl-CoA dehydrogenase  25.44 
 
 
381 aa  60.8  0.00000004  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_008544  Bcen2424_6749  acyl-CoA dehydrogenase type 2  26.87 
 
 
412 aa  60.8  0.00000004  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.144379 
 
 
-
 
NC_009073  Pcal_1308  acyl-CoA dehydrogenase domain-containing protein  24.43 
 
 
407 aa  60.8  0.00000004  Pyrobaculum calidifontis JCM 11548  Archaea  n/a    normal  0.0345991 
 
 
-
 
NC_013595  Sros_6601  Acyl-CoA dehydrogenase-like protein  26 
 
 
425 aa  60.8  0.00000004  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0223249  normal  0.275726 
 
 
-
 
NC_005945  BAS5191  acyl-CoA dehydrogenase  25.3 
 
 
376 aa  60.5  0.00000005  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5587  acyl-CoA dehydrogenase  25.3 
 
 
376 aa  60.5  0.00000005  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B1901  putative acyl-CoA dehydrogenase  26.18 
 
 
388 aa  60.5  0.00000005  Burkholderia xenovorans LB400  Bacteria  normal  0.14325  normal 
 
 
-
 
NC_007953  Bxe_C0852  putative acyl-CoA dehydrogenase  25.58 
 
 
390 aa  60.5  0.00000005  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.0725613 
 
 
-
 
NC_011004  Rpal_1802  acyl-CoA dehydrogenase domain protein  25.9 
 
 
390 aa  60.5  0.00000005  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.586412  n/a   
 
 
-
 
NC_008463  PA14_31540  putative acyl-CoA dehydrogenase  25.23 
 
 
375 aa  60.5  0.00000005  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.430124  hitchhiker  0.000095284 
 
 
-
 
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