Gene Mmcs_3488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_3488 
Symbol 
ID4112320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp3715962 
End bp3717197 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content72% 
IMG OID638032623 
ProductAcyl-CoA dehydrogenase, type 2-like protein 
Protein accessionYP_640651 
Protein GI108800454 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCATCA CGCCCGAGAC CACCGCCCCG ACCCTGGTGT CGGTGGACCA GACCCTCGCG 
GTCGCCCGCC GTGTCGCGGC CGAGATCGCC GTCGGTGCCG TCGACCGCGA AGTCCGCGGA
GTCTGGCCCG AGGCGGAACT GCGCCGCGTC GCCGAGAGCG GTCTGCTCGG CATCATCGTG
CCCGAACGGT TCGGCGGACC CGATCTGCCC CGCTCGACGG CGGTCGAGGT GCTGCGCATC
CTGTCCGAGG CGGATTCGGC GGTCGGACAG TTGTTGCTGG CGCACTTCGT CCTCAACGCC
GCCATCGGCG GGCTCGGTGA CACGGAACCG GCCCCGACGA TCTACCGCGA CGTTGTGGCC
GGAGCCCAAC TGGGCAATGC CACCGTCGAG CGCGGTACCC GGCTCAGCGT CGACCGGCTG
ACCACGGTGA CCCGCCGGCC AGGCGGTGGC TGGGTGCTCG ACGGGACGAA GTACTACGCC
ACCGGAACGC TCGGCGCGAG CTGGATCGCC GTCGCGGCCC GGATCGCGGA CACCGAACCA
GCGCACGGCG CAACGGTTTT CGTGCGTCCC ACCGATCCCG GTGTCACCTT GAACCTGGAC
CGCTGGTCGT CGTTCGGCCA GCGTGGCACC GCCAGCGGCG AGGTGGTGTT CGACCGGGTG
GCCGTCGACG ATCCCTACGT GATCGACGAA GGTCCCGATC CCGACCCGGT GACCTCCCCG
CCGTCGGTGC TCGGCGCCTT CGACCAGGCG CTGCACGCGG CGGTCGACAT CGGGATCGCC
CGCGCGGCCC TGACGGACGG CGCACGCTTC GTCACCACCA AGAGCCGGCC GTGGTTCGAG
GCCGGTGTCG ACAGCGCCGC CGACGAACCG CACGTCGTAC GCCGGTTCGG TGAGCTGACC
GCGCGGCTCT ACGCCCTCGA GGCACTGCTC GCCGCCGGGA CGGCCCGCAT CGACGAGGCG
CTGACCGAAC CGGAGCTGAC CCGTGAATCC GCCGCGGCGG CCTCACTGCA GGTGGCTGCG
GCCAAGGCGC TCGCCCAGGA GTTCGCCGTC GAGATCGCCA GCGGCGTCTT CGAACTCGCC
GGCGCCTCGG CCACCGACCG CGGGTACGCG CTGGACCGGC ACTGGCGCAA CGTGCGGGTG
CACTCGCTGC ACGATCCGGC CCGCTGGAAG TACGTCCACC TCGGCAACCA CACCCTGCGC
GGCACGCTTC CCCCGCGCCT CGGTGTCCTG CTCTGA
 
Protein sequence
MTITPETTAP TLVSVDQTLA VARRVAAEIA VGAVDREVRG VWPEAELRRV AESGLLGIIV 
PERFGGPDLP RSTAVEVLRI LSEADSAVGQ LLLAHFVLNA AIGGLGDTEP APTIYRDVVA
GAQLGNATVE RGTRLSVDRL TTVTRRPGGG WVLDGTKYYA TGTLGASWIA VAARIADTEP
AHGATVFVRP TDPGVTLNLD RWSSFGQRGT ASGEVVFDRV AVDDPYVIDE GPDPDPVTSP
PSVLGAFDQA LHAAVDIGIA RAALTDGARF VTTKSRPWFE AGVDSAADEP HVVRRFGELT
ARLYALEALL AAGTARIDEA LTEPELTRES AAAASLQVAA AKALAQEFAV EIASGVFELA
GASATDRGYA LDRHWRNVRV HSLHDPARWK YVHLGNHTLR GTLPPRLGVL L