Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_1778 |
Symbol | |
ID | 5747336 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 1977602 |
End bp | 1978879 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641296858 |
Product | acyl-CoA dehydrogenase type 2 |
Protein accession | YP_001562805 |
Protein GI | 160897223 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.251662 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.768767 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACAGA CATCGACCCA AGAGTTGCAG GCCCTGGCCT CCACGCCGGG CAGCCAGCCC GCGCCCGCCG CGCCTCCCGC CCGGCCCGCC CACATCATCG GCAGCGAGGC CGAGGCGCTG GAAGCGGCCC GCAGTTTTGC CGCCCTCATC GCCCCCGGCG CCCTGGCGCG CGACCGCGAC CGCCTGCTGC CCTGGCAGGA GGTGGAGCAG TTCAGCCAGA GCGGCCTGTG GGGCATCACC ATTCCCCGGG AGTACGGCGG CGCGGGCGTG TCCACGGCCA CGCTGACGCG GGCCATTGCC CTGATCGCGG CGGCCGATGG CAACTTCGGC CACATTCCGC AGAACCACTA CTACTCGCTG GAAGTGCTGC GCGTGGGCGG ATCGCCCGCG CAAAAGGCCT TCTTCTATGA CCGTGTGCTG CGCGGCGAAC GCCTGGGCAA TGCGCTGGCC GAGATCGGCC ACCGCGACTT CCAGCGCCGC ACCCGGCTGC TGCGCGACAG CGGCGGCTGG TTCGTGCAGG GGCGCAAGTT CTATTGCACG GGCGCCCTGT TCGCGCACTG GATTCCCACC CTGGTCAGCG CGCAGGAAGA GGCGCCGGGG CAAGGCGAGC GCATGTATCT GGTCTTCATC CCGCGCGATG CGGCCGGCGT CACCGTCACC GACGACTGGG ATGGCTTCGG CCAGCGCGTG ACGGGCAGCG GCTCCGTGCA GTTCGACCGC GTGCGCGTGG AGCCCGAATG GGTGGTGCCC TTCACCAGTT CCTTCGAGCG GCCCACCACC ATCGGCCCCT TCGCCCAGAT CATCCATGCC GCCCTGGACG CGGGCATTGG CCACGGCGCA CTGCAGGCCG CCCTGCCCTT CATCCGCGAG CATGCGCGGC CCTGGGTGGA CGCGGGCGTG GCCAGCGCCA CGCAGGACCC GCTGCTGCTG CAGCAACTGG GCAATGTCCA CGTGCGCCTG CGCGCCGCCG ATGCCCTGGT GGCCCGCGCG GCCCTGGCCG TGGACGCCGC CCAGCGCACG CCCACGGACG ACAGCGTGGC CGCTGCCTCG GTGGCCGTGG CCCAGGCCAA GGCGCTGAGC ACCAGCGCCA GCCTGCTGGC CGGCAGCAAG CTGTTCGAGC TGGCGGGCAC GGCCTCCACC CTGGCGGGAC AGGGCCTGGA CCGCTTCTGG CGCAACGCGC GCACCCACAC CCTGCACGAC CCCGTGCGCT GGAAATACCA CGCCGTGGGC AACTACGTGC TCAACGGCAT ACGCCCGCCG CGCCATGGCG CGCTCTGA
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Protein sequence | MTQTSTQELQ ALASTPGSQP APAAPPARPA HIIGSEAEAL EAARSFAALI APGALARDRD RLLPWQEVEQ FSQSGLWGIT IPREYGGAGV STATLTRAIA LIAAADGNFG HIPQNHYYSL EVLRVGGSPA QKAFFYDRVL RGERLGNALA EIGHRDFQRR TRLLRDSGGW FVQGRKFYCT GALFAHWIPT LVSAQEEAPG QGERMYLVFI PRDAAGVTVT DDWDGFGQRV TGSGSVQFDR VRVEPEWVVP FTSSFERPTT IGPFAQIIHA ALDAGIGHGA LQAALPFIRE HARPWVDAGV ASATQDPLLL QQLGNVHVRL RAADALVARA ALAVDAAQRT PTDDSVAAAS VAVAQAKALS TSASLLAGSK LFELAGTAST LAGQGLDRFW RNARTHTLHD PVRWKYHAVG NYVLNGIRPP RHGAL
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