Gene Daci_1778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1778 
Symbol 
ID5747336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1977602 
End bp1978879 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content72% 
IMG OID641296858 
Productacyl-CoA dehydrogenase type 2 
Protein accessionYP_001562805 
Protein GI160897223 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.251662 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.768767 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACAGA CATCGACCCA AGAGTTGCAG GCCCTGGCCT CCACGCCGGG CAGCCAGCCC 
GCGCCCGCCG CGCCTCCCGC CCGGCCCGCC CACATCATCG GCAGCGAGGC CGAGGCGCTG
GAAGCGGCCC GCAGTTTTGC CGCCCTCATC GCCCCCGGCG CCCTGGCGCG CGACCGCGAC
CGCCTGCTGC CCTGGCAGGA GGTGGAGCAG TTCAGCCAGA GCGGCCTGTG GGGCATCACC
ATTCCCCGGG AGTACGGCGG CGCGGGCGTG TCCACGGCCA CGCTGACGCG GGCCATTGCC
CTGATCGCGG CGGCCGATGG CAACTTCGGC CACATTCCGC AGAACCACTA CTACTCGCTG
GAAGTGCTGC GCGTGGGCGG ATCGCCCGCG CAAAAGGCCT TCTTCTATGA CCGTGTGCTG
CGCGGCGAAC GCCTGGGCAA TGCGCTGGCC GAGATCGGCC ACCGCGACTT CCAGCGCCGC
ACCCGGCTGC TGCGCGACAG CGGCGGCTGG TTCGTGCAGG GGCGCAAGTT CTATTGCACG
GGCGCCCTGT TCGCGCACTG GATTCCCACC CTGGTCAGCG CGCAGGAAGA GGCGCCGGGG
CAAGGCGAGC GCATGTATCT GGTCTTCATC CCGCGCGATG CGGCCGGCGT CACCGTCACC
GACGACTGGG ATGGCTTCGG CCAGCGCGTG ACGGGCAGCG GCTCCGTGCA GTTCGACCGC
GTGCGCGTGG AGCCCGAATG GGTGGTGCCC TTCACCAGTT CCTTCGAGCG GCCCACCACC
ATCGGCCCCT TCGCCCAGAT CATCCATGCC GCCCTGGACG CGGGCATTGG CCACGGCGCA
CTGCAGGCCG CCCTGCCCTT CATCCGCGAG CATGCGCGGC CCTGGGTGGA CGCGGGCGTG
GCCAGCGCCA CGCAGGACCC GCTGCTGCTG CAGCAACTGG GCAATGTCCA CGTGCGCCTG
CGCGCCGCCG ATGCCCTGGT GGCCCGCGCG GCCCTGGCCG TGGACGCCGC CCAGCGCACG
CCCACGGACG ACAGCGTGGC CGCTGCCTCG GTGGCCGTGG CCCAGGCCAA GGCGCTGAGC
ACCAGCGCCA GCCTGCTGGC CGGCAGCAAG CTGTTCGAGC TGGCGGGCAC GGCCTCCACC
CTGGCGGGAC AGGGCCTGGA CCGCTTCTGG CGCAACGCGC GCACCCACAC CCTGCACGAC
CCCGTGCGCT GGAAATACCA CGCCGTGGGC AACTACGTGC TCAACGGCAT ACGCCCGCCG
CGCCATGGCG CGCTCTGA
 
Protein sequence
MTQTSTQELQ ALASTPGSQP APAAPPARPA HIIGSEAEAL EAARSFAALI APGALARDRD 
RLLPWQEVEQ FSQSGLWGIT IPREYGGAGV STATLTRAIA LIAAADGNFG HIPQNHYYSL
EVLRVGGSPA QKAFFYDRVL RGERLGNALA EIGHRDFQRR TRLLRDSGGW FVQGRKFYCT
GALFAHWIPT LVSAQEEAPG QGERMYLVFI PRDAAGVTVT DDWDGFGQRV TGSGSVQFDR
VRVEPEWVVP FTSSFERPTT IGPFAQIIHA ALDAGIGHGA LQAALPFIRE HARPWVDAGV
ASATQDPLLL QQLGNVHVRL RAADALVARA ALAVDAAQRT PTDDSVAAAS VAVAQAKALS
TSASLLAGSK LFELAGTAST LAGQGLDRFW RNARTHTLHD PVRWKYHAVG NYVLNGIRPP
RHGAL