42 homologs were found in PanDaTox collection
for query gene Fjoh_2048 on replicon NC_009441
Organism: Flavobacterium johnsoniae UW101



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009441  Fjoh_2048  XRE family transcriptional regulator  100 
 
 
136 aa  275  2e-73  Flavobacterium johnsoniae UW101  Bacteria  normal  0.36941  n/a   
 
 
-
 
NC_009441  Fjoh_2335  XRE family transcriptional regulator  80.15 
 
 
135 aa  219  9.999999999999999e-57  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_3720  XRE family transcriptional regulator  77.54 
 
 
138 aa  215  2e-55  Flavobacterium johnsoniae UW101  Bacteria  normal  0.0580307  n/a   
 
 
-
 
NC_009441  Fjoh_3648  XRE family transcriptional regulator  76.09 
 
 
138 aa  210  7e-54  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_3677  XRE family transcriptional regulator  76.09 
 
 
138 aa  208  2e-53  Flavobacterium johnsoniae UW101  Bacteria  normal  0.356584  n/a   
 
 
-
 
NC_009441  Fjoh_3628  XRE family transcriptional regulator  70.07 
 
 
135 aa  194  5.000000000000001e-49  Flavobacterium johnsoniae UW101  Bacteria  normal  0.0172593  n/a   
 
 
-
 
NC_009441  Fjoh_0632  XRE family transcriptional regulator  70.21 
 
 
131 aa  187  4e-47  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_2606  XRE family transcriptional regulator  72.66 
 
 
129 aa  186  1e-46  Flavobacterium johnsoniae UW101  Bacteria  normal  0.327119  n/a   
 
 
-
 
NC_009441  Fjoh_1284  XRE family transcriptional regulator  69.85 
 
 
127 aa  183  7e-46  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_0465  XRE family transcriptional regulator  64.29 
 
 
138 aa  171  1.9999999999999998e-42  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_0686  XRE family transcriptional regulator  60.71 
 
 
137 aa  166  1e-40  Flavobacterium johnsoniae UW101  Bacteria  normal  0.0453336  n/a   
 
 
-
 
NC_009441  Fjoh_2157  XRE family plasmid maintenance system antidote protein  59.56 
 
 
136 aa  162  1.0000000000000001e-39  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_1155  XRE family transcriptional regulator  63.31 
 
 
129 aa  160  4.0000000000000004e-39  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_2571  XRE family transcriptional regulator  61.59 
 
 
131 aa  159  2e-38  Flavobacterium johnsoniae UW101  Bacteria  normal  0.255582  n/a   
 
 
-
 
NC_009441  Fjoh_4874  XRE family transcriptional regulator  61.03 
 
 
133 aa  145  2.0000000000000003e-34  Flavobacterium johnsoniae UW101  Bacteria  normal  0.0264852  n/a   
 
 
-
 
NC_009441  Fjoh_4739  XRE family transcriptional regulator  59.71 
 
 
132 aa  142  1e-33  Flavobacterium johnsoniae UW101  Bacteria  normal  0.391466  n/a   
 
 
-
 
NC_013037  Dfer_0967  helix-turn-helix domain protein  47.89 
 
 
144 aa  114  3.9999999999999997e-25  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.131013  decreased coverage  0.000141679 
 
 
-
 
NC_009441  Fjoh_2854  hypothetical protein  45.19 
 
 
131 aa  97.4  6e-20  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_4478  helix-turn-helix domain protein  43.41 
 
 
140 aa  95.5  2e-19  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.320696 
 
 
-
 
NC_009441  Fjoh_3145  hypothetical protein  40.77 
 
 
137 aa  90.9  5e-18  Flavobacterium johnsoniae UW101  Bacteria  normal  0.271734  n/a   
 
 
-
 
NC_009441  Fjoh_1125  hypothetical protein  39.39 
 
 
139 aa  90.1  8e-18  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_2816  hypothetical protein  40.46 
 
 
135 aa  87.8  4e-17  Flavobacterium johnsoniae UW101  Bacteria  normal  0.630225  n/a   
 
 
-
 
NC_009441  Fjoh_0054  hypothetical protein  38.46 
 
 
134 aa  86.3  1e-16  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_1876  hypothetical protein  39.55 
 
 
137 aa  84.3  5e-16  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_0927  hypothetical protein  39.69 
 
 
139 aa  82.8  0.000000000000001  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.121235  normal  0.0771461 
 
 
-
 
NC_013037  Dfer_0817  hypothetical protein  42.52 
 
 
138 aa  80.9  0.000000000000006  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.0308517  normal 
 
 
-
 
NC_009441  Fjoh_4999  hypothetical protein  35.11 
 
 
133 aa  80.5  0.000000000000008  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_4221  hypothetical protein  40.46 
 
 
141 aa  79  0.00000000000002  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.664733  normal 
 
 
-
 
NC_009441  Fjoh_0656  hypothetical protein  34.62 
 
 
134 aa  78.6  0.00000000000003  Flavobacterium johnsoniae UW101  Bacteria  hitchhiker  0.000000102711  n/a   
 
 
-
 
NC_013037  Dfer_0813  hypothetical protein  43.86 
 
 
110 aa  77  0.00000000000008  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.0228663  normal 
 
 
-
 
NC_009441  Fjoh_4208  XRE family transcriptional regulator  39.66 
 
 
129 aa  60.5  0.000000008  Flavobacterium johnsoniae UW101  Bacteria  normal  0.629555  n/a   
 
 
-
 
NC_009975  MmarC6_0325  XRE family transcriptional regulator  26.47 
 
 
192 aa  41.6  0.004  Methanococcus maripaludis C6  Archaea  normal  n/a   
 
 
-
 
NC_007204  Psyc_0472  Cro/CI family transcriptional regulator  29.69 
 
 
224 aa  41.6  0.004  Psychrobacter arcticus 273-4  Bacteria  normal  normal  0.404493 
 
 
-
 
NC_011830  Dhaf_2097  transcriptional regulator, XRE family  33.75 
 
 
361 aa  41.2  0.005  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.961796  n/a   
 
 
-
 
NC_008530  LGAS_0234  XRE family transcriptional regulator  35.59 
 
 
334 aa  40.8  0.006  Lactobacillus gasseri ATCC 33323  Bacteria  hitchhiker  0.00407493  hitchhiker  0.000000000000790722 
 
 
-
 
NC_009952  Dshi_1221  transcriptional regulator  21.17 
 
 
468 aa  40.8  0.006  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.749153  normal  0.453619 
 
 
-
 
NC_009135  MmarC5_1039  MerR family transcriptional regulator  25.49 
 
 
192 aa  40.8  0.007  Methanococcus maripaludis C5  Archaea  normal  n/a   
 
 
-
 
NC_014151  Cfla_1409  transcriptional regulator, XRE family  36.76 
 
 
75 aa  40.4  0.008  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.503834  normal 
 
 
-
 
NC_011004  Rpal_2644  transcriptional regulator, XRE family  31.94 
 
 
474 aa  40.4  0.008  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007355  Mbar_A2819  MerR family transcriptional regulator  33.33 
 
 
192 aa  40.4  0.009  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal  0.142376 
 
 
-
 
NC_009637  MmarC7_1587  helix-turn-helix domain-containing protein  25.49 
 
 
192 aa  40  0.01  Methanococcus maripaludis C7  Archaea  normal  0.494606  normal 
 
 
-
 
NC_007953  Bxe_C0122  XRE family transcriptional regulator  35.53 
 
 
91 aa  40  0.01  Burkholderia xenovorans LB400  Bacteria  normal  0.347741  normal 
 
 
-
 
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