| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_1039 |
|---|
| Symbol | |
|---|
| ID | 4928718 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009135 |
|---|
| Strand | + |
|---|
| Start bp | 1001621 |
|---|
| End bp | 1002199 |
|---|
| Gene Length | 579 bp |
|---|
| Protein Length | 192 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 640166536 |
|---|
| Product | MerR family transcriptional regulator |
|---|
| Protein accession | YP_001097559 |
|---|
| Protein GI | 134046073 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1813] Predicted transcription factor, homolog of eukaryotic MBF1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGAAA AAAACCACGT CGGCATTAAA ATCAAACAAA CACGAGAAAG ACAAAATATG
TCAATCGAAG AACTTGCAAA AGCAAGTAAC AGCAGTGTAA ATCTTATCGA AAGCTTGGAA
AATGGAGATT TAGTTCCGTC ATTAACCCCT ATTTTCAAAA TTGCAAGAGC TCTTGGCGTT
AGACTCGGTA CATTTTTAGA CGATGCTCCT CAGAGCGGTC CTGTGTTAAC CAAATCTGGA
AGCTCAGAAA GTATCGTCAG ATTTTCTGGA AAAATCGATG GAACCAAAGA TAGCAAATTA
GATTTTTATG CACTCGCAGC TGAAAAACAG GACAGACATA TGGAACCATT CCTAATAGAT
GTTCATCCAC TTGAATCTGA TGAATACAAA CTCTCTTCAC ATGAAGGAGA AGAATTTATC
TATGTAATGG ATGGAGAAAT CGAAGTATTA TATGGGCAGG AAAAATACCT CCTTAAAAAA
GGAGACAGCA TATACTACGA TTCGATAGTT CCACATGATT TGCATGCATT TGGAAAAGAT
GTTGCAAAAA TTCTTGCAGT AATATACTCA CCATTCTAA
|
|---|
| Protein sequence | MAEKNHVGIK IKQTRERQNM SIEELAKASN SSVNLIESLE NGDLVPSLTP IFKIARALGV
RLGTFLDDAP QSGPVLTKSG SSESIVRFSG KIDGTKDSKL DFYALAAEKQ DRHMEPFLID
VHPLESDEYK LSSHEGEEFI YVMDGEIEVL YGQEKYLLKK GDSIYYDSIV PHDLHAFGKD
VAKILAVIYS PF
|
|---|
| |