Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_1221 |
Symbol | |
ID | 5711779 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 1261791 |
End bp | 1263197 |
Gene Length | 1407 bp |
Protein Length | 468 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641267133 |
Product | transcriptional regulator |
Protein accession | YP_001532564 |
Protein GI | 159043770 |
COG category | [R] General function prediction only |
COG ID | [COG3800] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.749153 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.453619 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCAAGA CACTGGTGGG GCCCAGGCTC CGGGCCCTGC GGCGGGAACG CAAACAGACC CAGGCCGAGA TGGCCCAGGC CCTCGGGGTG TCGCCGGCCT ATGTGAACCT GCTGGAGAAC AACCAGCGCA GCCTGTCGGT GCAGATGCTC ATGGCGCTGA CCGAGACCTA CAACGTGGAC TGGCGCGACC TGGTGAAGGA CGACGCGGCC ACGCAGCTGA CCGACCTGCG CCATGCCATG CAGGACCCGG TCTTCACAGA TGCCGCCCCG GACCTGACCG AGTTGCGCGC GGCCCTGGAT CACGCGCCCA AGCTGGTCTC GCGGCTGCTG CAGCTCCACC AGGCCCATCG CAGCACGCTT GAAAAGGTGA TGCGCATGGG CTCCAGCGGG GTGCTGCCGG ACCTGACCGC GACCTCGCCC GAGACGATCA TCCACGACTT CTTCCGCAAC CATCGCAACC ATTTCGACGA GCTGGAATGC GCCGCCGAGG CTGTGCGCGC CGAGATGCCG GGTCGCCCCG ACGACATCTA TGGCGACCTC AAGACGCGGC TCGCCACCCT GCACGGGATC ACCGTGACCC TGGAGCGTGT CCATGACATG CCAGACAGCC TGCGGGTCTA TGATGCACGC CGCAAGGTGC TGCGGATCTC CGAGGCGCTG GACCATCCCA ACCGCATCTT CCAGCTGGCC CATGTCCTGG GCCTGGTCGA GTTCCCCGAC GTGTTCGACA GCCTGACCGC GGGGGCGGGG CTGCAGGAGG GCTCGGGGCT GGGGCGCTGC CGGGTGGAGC TGGCCAACTA CTTCGCCGCC GCCCTGCTGA TGCCCTATGA CGAGATCCTG TCGCTGGCCG AGACGACACG CTACGACGTG GACCGGATTT CGGCGGCCTT CTCGGTCTCG TTCGAGCAGG TCTGCCACCG GCTGACCACC CTGCAGCGCG ACGGGGCGAA GGGGGTGCCG TTCTTCTTTC TGCGGATCGA CAAGGCGGGC AATGTGTCGA AACGGTTCAA CTCGACCTCG TTCCACCTGG CCGAATATGG CGGGGCCTGC CCGGTCTGGA ACATCCACAA CACCTTCACC TCGCCCGGCG TGATCCTGCC GCAATTCGTG GAGCTTCCCG ACGGGGAACG TTTCTTCACC ATCAGCCGGA CCACCGATCG CCCGGTCTTC AGCCGCGACA CGCAGGAGCG CCGCCTCGCG GTCGCGCTCG GCTGCGAGAT GAGCCATGCG GACCGGATCG GCTATGCCGC GCCCTACCGG GTCAGCGAAA AGGGGCTGTT CAGCAAGATC GGGATCAATT GCCAGATGTG CCCGCGCCAG AGCTGTTCCC AGCGCGCTCA CCAGCCGCTC CACATGGATC TGCCGCTCGA CACCAACCGG CGCGGGAACA CTCGCTACGA AAGCTGA
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Protein sequence | MRKTLVGPRL RALRRERKQT QAEMAQALGV SPAYVNLLEN NQRSLSVQML MALTETYNVD WRDLVKDDAA TQLTDLRHAM QDPVFTDAAP DLTELRAALD HAPKLVSRLL QLHQAHRSTL EKVMRMGSSG VLPDLTATSP ETIIHDFFRN HRNHFDELEC AAEAVRAEMP GRPDDIYGDL KTRLATLHGI TVTLERVHDM PDSLRVYDAR RKVLRISEAL DHPNRIFQLA HVLGLVEFPD VFDSLTAGAG LQEGSGLGRC RVELANYFAA ALLMPYDEIL SLAETTRYDV DRISAAFSVS FEQVCHRLTT LQRDGAKGVP FFFLRIDKAG NVSKRFNSTS FHLAEYGGAC PVWNIHNTFT SPGVILPQFV ELPDGERFFT ISRTTDRPVF SRDTQERRLA VALGCEMSHA DRIGYAAPYR VSEKGLFSKI GINCQMCPRQ SCSQRAHQPL HMDLPLDTNR RGNTRYES
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