38 homologs were found in PanDaTox collection
for query gene Fjoh_2335 on replicon NC_009441
Organism: Flavobacterium johnsoniae UW101



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009441  Fjoh_2335  XRE family transcriptional regulator  100 
 
 
135 aa  272  1.0000000000000001e-72  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_3720  XRE family transcriptional regulator  80.58 
 
 
138 aa  224  3e-58  Flavobacterium johnsoniae UW101  Bacteria  normal  0.0580307  n/a   
 
 
-
 
NC_009441  Fjoh_2048  XRE family transcriptional regulator  80.15 
 
 
136 aa  219  9.999999999999999e-57  Flavobacterium johnsoniae UW101  Bacteria  normal  0.36941  n/a   
 
 
-
 
NC_009441  Fjoh_3628  XRE family transcriptional regulator  77.78 
 
 
135 aa  218  1.9999999999999999e-56  Flavobacterium johnsoniae UW101  Bacteria  normal  0.0172593  n/a   
 
 
-
 
NC_009441  Fjoh_3648  XRE family transcriptional regulator  76.81 
 
 
138 aa  214  4e-55  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_3677  XRE family transcriptional regulator  76.81 
 
 
138 aa  213  8e-55  Flavobacterium johnsoniae UW101  Bacteria  normal  0.356584  n/a   
 
 
-
 
NC_009441  Fjoh_0632  XRE family transcriptional regulator  75.36 
 
 
131 aa  202  1e-51  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_1284  XRE family transcriptional regulator  69.63 
 
 
127 aa  182  1.0000000000000001e-45  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_1155  XRE family transcriptional regulator  70.07 
 
 
129 aa  182  2.0000000000000003e-45  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_2606  XRE family transcriptional regulator  73.81 
 
 
129 aa  180  7e-45  Flavobacterium johnsoniae UW101  Bacteria  normal  0.327119  n/a   
 
 
-
 
NC_009441  Fjoh_0465  XRE family transcriptional regulator  65.94 
 
 
138 aa  178  2e-44  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_2157  XRE family plasmid maintenance system antidote protein  66.18 
 
 
136 aa  171  2.9999999999999996e-42  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_0686  XRE family transcriptional regulator  65.47 
 
 
137 aa  170  6.999999999999999e-42  Flavobacterium johnsoniae UW101  Bacteria  normal  0.0453336  n/a   
 
 
-
 
NC_009441  Fjoh_2571  XRE family transcriptional regulator  65.47 
 
 
131 aa  164  4e-40  Flavobacterium johnsoniae UW101  Bacteria  normal  0.255582  n/a   
 
 
-
 
NC_009441  Fjoh_4739  XRE family transcriptional regulator  60.71 
 
 
132 aa  159  2e-38  Flavobacterium johnsoniae UW101  Bacteria  normal  0.391466  n/a   
 
 
-
 
NC_009441  Fjoh_4874  XRE family transcriptional regulator  60 
 
 
133 aa  152  2e-36  Flavobacterium johnsoniae UW101  Bacteria  normal  0.0264852  n/a   
 
 
-
 
NC_013037  Dfer_0967  helix-turn-helix domain protein  50 
 
 
144 aa  119  9.999999999999999e-27  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.131013  decreased coverage  0.000141679 
 
 
-
 
NC_009441  Fjoh_2816  hypothetical protein  43.85 
 
 
135 aa  101  3e-21  Flavobacterium johnsoniae UW101  Bacteria  normal  0.630225  n/a   
 
 
-
 
NC_013037  Dfer_4478  helix-turn-helix domain protein  44.09 
 
 
140 aa  94.7  4e-19  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.320696 
 
 
-
 
NC_009441  Fjoh_2854  hypothetical protein  44.7 
 
 
131 aa  92.8  2e-18  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_3145  hypothetical protein  41.54 
 
 
137 aa  90.9  5e-18  Flavobacterium johnsoniae UW101  Bacteria  normal  0.271734  n/a   
 
 
-
 
NC_013037  Dfer_0927  hypothetical protein  43.08 
 
 
139 aa  89  2e-17  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.121235  normal  0.0771461 
 
 
-
 
NC_013037  Dfer_0817  hypothetical protein  42.34 
 
 
138 aa  87.4  6e-17  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.0308517  normal 
 
 
-
 
NC_009441  Fjoh_0054  hypothetical protein  39.53 
 
 
134 aa  86.7  1e-16  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_4221  hypothetical protein  42.03 
 
 
141 aa  85.5  2e-16  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.664733  normal 
 
 
-
 
NC_009441  Fjoh_1876  hypothetical protein  41.67 
 
 
137 aa  85.5  2e-16  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_1125  hypothetical protein  38.64 
 
 
139 aa  84.3  5e-16  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_0656  hypothetical protein  36.22 
 
 
134 aa  83.2  0.000000000000001  Flavobacterium johnsoniae UW101  Bacteria  hitchhiker  0.000000102711  n/a   
 
 
-
 
NC_009441  Fjoh_4999  hypothetical protein  38.93 
 
 
133 aa  81.3  0.000000000000004  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_0813  hypothetical protein  41.44 
 
 
110 aa  79.3  0.00000000000001  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.0228663  normal 
 
 
-
 
NC_009441  Fjoh_4208  XRE family transcriptional regulator  39.64 
 
 
129 aa  55.8  0.0000002  Flavobacterium johnsoniae UW101  Bacteria  normal  0.629555  n/a   
 
 
-
 
NC_013165  Shel_00980  predicted transcriptional regulator  34.33 
 
 
459 aa  44.3  0.0006  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.224409  normal  0.709118 
 
 
-
 
NC_009656  PSPA7_0755  transcriptional regulator PrtR  37.1 
 
 
256 aa  42.4  0.002  Pseudomonas aeruginosa PA7  Bacteria  normal  0.011984  n/a   
 
 
-
 
NC_008463  PA14_07960  transcriptional regulator PrtR  37.1 
 
 
256 aa  42.4  0.002  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0101148  hitchhiker  0.000834984 
 
 
-
 
NC_007355  Mbar_A2819  MerR family transcriptional regulator  38.33 
 
 
192 aa  40.8  0.007  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal  0.142376 
 
 
-
 
NC_007204  Psyc_0472  Cro/CI family transcriptional regulator  37.74 
 
 
224 aa  40.4  0.008  Psychrobacter arcticus 273-4  Bacteria  normal  normal  0.404493 
 
 
-
 
NC_013204  Elen_2457  transcriptional regulator, XRE family  36.92 
 
 
380 aa  40.4  0.008  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_009135  MmarC5_1762  XRE family transcriptional regulator  31.33 
 
 
159 aa  40.4  0.009  Methanococcus maripaludis C5  Archaea  normal  n/a   
 
 
-
 
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