Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_0967 |
Symbol | |
ID | 8224536 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 1123987 |
End bp | 1124421 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644928827 |
Product | helix-turn-helix domain protein |
Protein accession | YP_003085381 |
Protein GI | 255034760 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.131013 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.000141679 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAGCACTT CGCAAGAAAT GACAAAACAC ATCCACCACG GCCGGAACAT CAAGCGCTTT CGGGAAATGT TGGGAATCAA GCAGGAAGGC TTAGCCTTCG AACTTGGCGG GGAATGGTCT CAAAAGAGGG TTTCGCTACT AGAGCAGAAG GAAGTCGTTG AACAGGAAAT CCTGGATCAG GTTGCTCAGA TACTGAAGGT TCCCGCAGAA GCAATCAAGA ATTTCGATGA AGACAAGGCT CTGAATGTAA TTTCAAATAC CTTCAATAGC CATGATTCAT CTACCATGAA TGCTGTTAAT GTCAATCCAA CATTCAATCC ATTAGATAAA CTAATTGAAA GCTACGATGA GAATCGAAAG CTTTACGAAC GTTTACTTAC GTCCGAACAG GAAAAAGTAG AGTTACTCAA GCGACTGCTT GAAAATGCAA AATGA
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Protein sequence | MSTSQEMTKH IHHGRNIKRF REMLGIKQEG LAFELGGEWS QKRVSLLEQK EVVEQEILDQ VAQILKVPAE AIKNFDEDKA LNVISNTFNS HDSSTMNAVN VNPTFNPLDK LIESYDENRK LYERLLTSEQ EKVELLKRLL ENAK
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