236 homologs were found in PanDaTox collection
for query gene Daro_3335 on replicon NC_007298
Organism: Dechloromonas aromatica RCB



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007298  Daro_3335  methylthioribose-1-phosphate isomerase  100 
 
 
362 aa  724    Dechloromonas aromatica RCB  Bacteria  normal  hitchhiker  0.000368125 
 
 
-
 
NC_011894  Mnod_6703  translation initiation factor, aIF-2BI family  59.5 
 
 
364 aa  405  1.0000000000000001e-112  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_0662  aIF-2BI family translation initiation factor  58.68 
 
 
365 aa  400  9.999999999999999e-111  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.437714 
 
 
-
 
NC_010505  Mrad2831_4121  aIF-2BI family translation initiation factor  60.06 
 
 
367 aa  400  9.999999999999999e-111  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_0674  translation initiation factor, aIF-2BI family  58.4 
 
 
365 aa  399  9.999999999999999e-111  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.887106  normal  0.0224655 
 
 
-
 
NC_011365  Gdia_0451  methylthioribose-1-phosphate isomerase  56.44 
 
 
365 aa  389  1e-107  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_6183  aIF-2BI family translation initiation factor  60.39 
 
 
365 aa  384  1e-105  Methylobacterium sp. 4-46  Bacteria  normal  0.995024  normal 
 
 
-
 
NC_011662  Tmz1t_3292  methylthioribose-1-phosphate isomerase  60.22 
 
 
356 aa  379  1e-104  Thauera sp. MZ1T  Bacteria  normal  0.178535  n/a   
 
 
-
 
NC_009952  Dshi_0521  methylthioribose-1-phosphate isomerase  55.22 
 
 
367 aa  375  1e-103  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_0641  translation initiation factor, aIF-2BI family  58.52 
 
 
365 aa  377  1e-103  Methylobacterium populi BJ001  Bacteria  normal  normal  0.173819 
 
 
-
 
NC_010581  Bind_0665  aIF-2BI family translation initiation factor  53.74 
 
 
362 aa  368  1e-101  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.360605  normal  0.588664 
 
 
-
 
NC_009484  Acry_0161  methylthioribose-1-phosphate isomerase  57.65 
 
 
367 aa  368  1e-101  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_0648  methylthioribose-1-phosphate isomerase  54.82 
 
 
367 aa  368  1e-101  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_4697  methylthioribose-1-phosphate isomerase  54.7 
 
 
374 aa  362  5.0000000000000005e-99  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.293654  normal 
 
 
-
 
NC_009672  Oant_4832  methylthioribose-1-phosphate isomerase  54.65 
 
 
364 aa  361  1e-98  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.633545  n/a   
 
 
-
 
NC_009621  Smed_5890  methylthioribose-1-phosphate isomerase  55.49 
 
 
364 aa  361  1e-98  Sinorhizobium medicae WSM419  Bacteria  normal  0.0342096  normal  0.365892 
 
 
-
 
NC_007925  RPC_4936  methylthioribose-1-phosphate isomerase  57.73 
 
 
373 aa  360  2e-98  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.313039 
 
 
-
 
NC_007643  Rru_A0360  methylthioribose-1-phosphate isomerase  57.34 
 
 
390 aa  359  3e-98  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_4113  aIF-2BI family translation initiation factor  57.87 
 
 
360 aa  359  3e-98  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_3353  translation initiation factor, aIF-2BI family  53.83 
 
 
366 aa  356  2.9999999999999997e-97  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_007958  RPD_4407  methylthioribose-1-phosphate isomerase  53.31 
 
 
374 aa  355  5e-97  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.791642  normal 
 
 
-
 
NC_011004  Rpal_5307  methylthioribose-1-phosphate isomerase  54.42 
 
 
374 aa  355  6.999999999999999e-97  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_2247  eIF-2B alpha/beta/delta-related uncharacterized protein  55.12 
 
 
364 aa  351  8.999999999999999e-96  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.679143  normal  0.145902 
 
 
-
 
NC_007947  Mfla_1913  methylthioribose-1-phosphate isomerase  58.59 
 
 
375 aa  351  1e-95  Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.000000486735  normal  0.985387 
 
 
-
 
NC_008820  P9303_25341  methylthioribose-1-phosphate isomerase  54.32 
 
 
370 aa  351  1e-95  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal 
 
 
-
 
NC_009428  Rsph17025_1886  methylthioribose-1-phosphate isomerase  53.31 
 
 
362 aa  342  8e-93  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.876537  normal 
 
 
-
 
NC_007493  RSP_2386  methylthioribose-1-phosphate isomerase  54.27 
 
 
364 aa  339  5e-92  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_1050  methylthioribose-1-phosphate isomerase  54.27 
 
 
364 aa  338  9e-92  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.246086  normal  0.396346 
 
 
-
 
NC_007575  Suden_1971  methylthioribose-1-phosphate isomerase  47.55 
 
 
359 aa  312  6.999999999999999e-84  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1306  eIF-2B alpha/beta/delta-related protein  50.41 
 
 
369 aa  305  7e-82  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.0012837  n/a   
 
 
-
 
NC_009972  Haur_2349  aIF-2BI family translation initiation factor  49.85 
 
 
358 aa  280  4e-74  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.944221  n/a   
 
 
-
 
NC_011831  Cagg_3560  translation initiation factor, aIF-2BI family  51.04 
 
 
357 aa  278  8e-74  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_012034  Athe_1360  translation initiation factor, aIF-2BI family  45.02 
 
 
342 aa  274  2.0000000000000002e-72  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.0559648  n/a   
 
 
-
 
NC_009616  Tmel_0254  aIF-2BI family translation initiation factor  47.11 
 
 
346 aa  274  2.0000000000000002e-72  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_0156  eIF-2B alpha/beta/delta-related uncharacterized protein  50.74 
 
 
354 aa  271  2e-71  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.232234  normal 
 
 
-
 
NC_009718  Fnod_1519  aIF-2BI family translation initiation factor  46.55 
 
 
350 aa  270  2e-71  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  0.889993  n/a   
 
 
-
 
NC_010003  Pmob_0810  aIF-2BI family translation initiation factor  46.84 
 
 
349 aa  270  4e-71  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0016  aIF-2BI family translation initiation factor  46.8 
 
 
343 aa  266  2.9999999999999995e-70  Thermotoga sp. RQ2  Bacteria  normal  0.570831  n/a   
 
 
-
 
NC_009486  Tpet_0016  aIF-2BI family translation initiation factor  46.8 
 
 
343 aa  266  2.9999999999999995e-70  Thermotoga petrophila RKU-1  Bacteria  normal  0.339634  n/a   
 
 
-
 
NC_009523  RoseRS_0485  aIF-2BI family translation initiation factor  51.33 
 
 
353 aa  265  1e-69  Roseiflexus sp. RS-1  Bacteria  normal  0.646058  normal 
 
 
-
 
NC_008009  Acid345_1175  translation initiation factor 2B subunit I  47.49 
 
 
354 aa  263  4e-69  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_008346  Swol_0779  S-methyl-5-thioribose-1-phosphate isomerase  46.47 
 
 
346 aa  263  4e-69  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.404257  n/a   
 
 
-
 
NC_009012  Cthe_0621  translation initiation factor 2B subunit I  45.53 
 
 
342 aa  262  4.999999999999999e-69  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.0997628  n/a   
 
 
-
 
NC_002939  GSU3379  aIF-2BI family translation initiation factor  46.55 
 
 
346 aa  261  8.999999999999999e-69  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_4322  aIF-2BI family translation initiation factor  47.45 
 
 
346 aa  257  2e-67  Geobacter uraniireducens Rf4  Bacteria  normal  0.394096  n/a   
 
 
-
 
NC_007517  Gmet_0072  translation initiation factor 2B subunit I  46.97 
 
 
346 aa  257  3e-67  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.25912 
 
 
-
 
NC_003909  BCE_4098  methylthioribose-1-phosphate isomerase  43.88 
 
 
351 aa  256  5e-67  Bacillus cereus ATCC 10987  Bacteria  normal  0.463174  n/a   
 
 
-
 
NC_013926  Aboo_1543  translation initiation factor, aIF-2BI family  46.93 
 
 
333 aa  255  9e-67  Aciduliprofundum boonei T469  Archaea  normal  0.0321135  n/a   
 
 
-
 
NC_005957  BT9727_3774  methylthioribose-1-phosphate isomerase  42.05 
 
 
351 aa  254  1.0000000000000001e-66  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_3765  translation initiation factor, aIF-2BI family  48.84 
 
 
345 aa  254  1.0000000000000001e-66  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.0692423  n/a   
 
 
-
 
NC_008609  Ppro_0510  aIF-2BI family translation initiation factor  44.48 
 
 
346 aa  254  2.0000000000000002e-66  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_2064  aIF-2BI family translation initiation factor  49.71 
 
 
346 aa  254  2.0000000000000002e-66  Desulfotomaculum reducens MI-1  Bacteria  unclonable  0.0000000777983  n/a   
 
 
-
 
NC_011773  BCAH820_4053  methylthioribose-1-phosphate isomerase  42.05 
 
 
351 aa  253  3e-66  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_013501  Rmar_1491  translation initiation factor, aIF-2BI family  48.25 
 
 
353 aa  253  4.0000000000000004e-66  Rhodothermus marinus DSM 4252  Bacteria  normal  0.626941  n/a   
 
 
-
 
NC_009675  Anae109_4334  eIF-2B alpha/beta/delta-related uncharacterized protein  48.38 
 
 
337 aa  253  4.0000000000000004e-66  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_011658  BCAH187_A4159  methylthioribose-1-phosphate isomerase  43.58 
 
 
351 aa  252  6e-66  Bacillus cereus AH187  Bacteria  normal  0.109098  n/a   
 
 
-
 
NC_005945  BAS3942  methylthioribose-1-phosphate isomerase  43.58 
 
 
351 aa  252  8.000000000000001e-66  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_4251  methylthioribose-1-phosphate isomerase  43.58 
 
 
351 aa  252  8.000000000000001e-66  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0332  methylthioribose-1-phosphate isomerase  44.25 
 
 
348 aa  251  1e-65  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0319  methylthioribose-1-phosphate isomerase  44.54 
 
 
347 aa  251  1e-65  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK3789  methylthioribose-1-phosphate isomerase  43.58 
 
 
351 aa  251  1e-65  Bacillus cereus E33L  Bacteria  normal  0.700016  n/a   
 
 
-
 
NC_011773  BCAH820_0379  methylthioribose-1-phosphate isomerase  44.25 
 
 
348 aa  251  1e-65  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_011772  BCG9842_B4924  methylthioribose-1-phosphate isomerase  44.25 
 
 
348 aa  251  1e-65  Bacillus cereus G9842  Bacteria  normal  0.64519  normal 
 
 
-
 
NC_007530  GBAA_0347  methylthioribose-1-phosphate isomerase  44.25 
 
 
347 aa  251  2e-65  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0327  methylthioribose-1-phosphate isomerase  43.95 
 
 
348 aa  251  2e-65  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0316  methylthioribose-1-phosphate isomerase  44.25 
 
 
348 aa  250  3e-65  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_3596  translation initiation factor, aIF-2BI family  46.73 
 
 
346 aa  249  4e-65  Geobacter lovleyi SZ  Bacteria  normal  0.82629  n/a   
 
 
-
 
NC_010730  SYO3AOP1_0676  translation initiation factor, aIF-2BI family  41.84 
 
 
339 aa  249  5e-65  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  0.0103604  n/a   
 
 
-
 
NC_014248  Aazo_1643  translation initiation factor  47.01 
 
 
344 aa  248  1e-64  'Nostoc azollae' 0708  Bacteria  normal  0.226672  n/a   
 
 
-
 
NC_011725  BCB4264_A0394  methylthioribose-1-phosphate isomerase  43.45 
 
 
348 aa  247  3e-64  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_0846  methylthioribose-1-phosphate isomerase  44.48 
 
 
356 aa  246  3e-64  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B1099  methylthioribose-1-phosphate isomerase  41.48 
 
 
353 aa  246  3e-64  Bacillus cereus G9842  Bacteria  normal  normal  0.767768 
 
 
-
 
NC_007908  Rfer_3749  putative translation initiation factor, aIF-2BI/5-methylthioribose-1-phosphate isomerase  46.24 
 
 
354 aa  246  4.9999999999999997e-64  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_1944  translation initiation factor 2B subunit I  47.16 
 
 
352 aa  246  4.9999999999999997e-64  Magnetococcus sp. MC-1  Bacteria  hitchhiker  0.00466755  normal  0.570212 
 
 
-
 
NC_011729  PCC7424_4687  methylthioribose-1-phosphate isomerase  44.71 
 
 
350 aa  246  4.9999999999999997e-64  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_011725  BCB4264_A4139  methylthioribose-1-phosphate isomerase  42.69 
 
 
353 aa  245  6.999999999999999e-64  Bacillus cereus B4264  Bacteria  normal  0.196624  n/a   
 
 
-
 
NC_007604  Synpcc7942_1992  translation initiation factor 2B subunit I  46.99 
 
 
348 aa  245  9e-64  Synechococcus elongatus PCC 7942  Bacteria  normal  normal  0.337411 
 
 
-
 
NC_011658  BCAH187_A0441  methylthioribose-1-phosphate isomerase  43.36 
 
 
348 aa  244  1.9999999999999999e-63  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_3753  translation initiation factor, aIF-2BI family  47.15 
 
 
346 aa  244  1.9999999999999999e-63  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_013385  Adeg_0964  translation initiation factor, aIF-2BI family  46.74 
 
 
351 aa  243  3e-63  Ammonifex degensii KC4  Bacteria  normal  0.518904  n/a   
 
 
-
 
NC_007413  Ava_3544  methylthioribose-1-phosphate isomerase  45.92 
 
 
347 aa  243  3.9999999999999997e-63  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_010718  Nther_0419  translation initiation factor 2B subunit I family (IF-2BI)  40.35 
 
 
347 aa  243  3.9999999999999997e-63  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.04546  normal 
 
 
-
 
NC_013205  Aaci_1646  translation initiation factor, aIF-2BI family  48.24 
 
 
340 aa  243  5e-63  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_0648  aIF-2BI family translation initiation factor  48.19 
 
 
348 aa  242  6e-63  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.674044  n/a   
 
 
-
 
NC_011146  Gbem_3646  translation initiation factor, aIF-2BI family  46.85 
 
 
346 aa  242  6e-63  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_014150  Bmur_2613  translation initiation factor, aIF-2BI family  41.45 
 
 
349 aa  241  1e-62  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_0999  aIF-2BI family translation initiation factor  48 
 
 
327 aa  241  1e-62  Meiothermus ruber DSM 1279  Bacteria  normal  0.260098  normal 
 
 
-
 
NC_014212  Mesil_1647  translation initiation factor, aIF-2BI family  48.46 
 
 
329 aa  241  2e-62  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_2033  aIF-2BI family translation initiation factor  41.57 
 
 
354 aa  241  2e-62  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_2170  aIF-2BI family translation initiation factor  49.85 
 
 
344 aa  239  5e-62  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_3816  methylthioribose-1-phosphate isomerase  45.8 
 
 
350 aa  238  9e-62  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.732544 
 
 
-
 
NC_013522  Taci_1036  translation initiation factor, aIF-2BI family  46.87 
 
 
347 aa  238  1e-61  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  0.313313  n/a   
 
 
-
 
NC_010184  BcerKBAB4_3861  methylthioribose-1-phosphate isomerase  41.79 
 
 
349 aa  238  1e-61  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.583783  n/a   
 
 
-
 
NC_014148  Plim_1381  translation initiation factor, aIF-2BI family  44.41 
 
 
362 aa  238  2e-61  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.705402  n/a   
 
 
-
 
NC_007519  Dde_0076  translation initiation factor 2B subunit I  45.53 
 
 
355 aa  236  3e-61  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_1881  aIF-2BI family translation initiation factor  42.32 
 
 
345 aa  236  4e-61  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_1971  translation initiation factor, aIF-2BI family  47.13 
 
 
345 aa  234  2.0000000000000002e-60  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00568517  n/a   
 
 
-
 
NC_007644  Moth_0703  translation initiation factor 2B subunit I  47.03 
 
 
351 aa  234  2.0000000000000002e-60  Moorella thermoacetica ATCC 39073  Bacteria  normal  hitchhiker  0.000787843 
 
 
-
 
NC_008312  Tery_2078  methylthioribose-1-phosphate isomerase  42.9 
 
 
353 aa  234  2.0000000000000002e-60  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.424406 
 
 
-
 
NC_011899  Hore_18480  putative translation initiation factor, aIF-2BI family  42.37 
 
 
355 aa  234  2.0000000000000002e-60  Halothermothrix orenii H 168  Bacteria  normal  0.0224403  n/a   
 
 
-
 
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