Gene Ava_3544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3544 
SymbolmtnA 
ID3679568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4413613 
End bp4414656 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content45% 
IMG OID637718896 
Productmethylthioribose-1-phosphate isomerase 
Protein accessionYP_324046 
Protein GI75909750 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0182] Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family 
TIGRFAM ID[TIGR00512] S-methyl-5-thioribose-1-phosphate isomerase
[TIGR00524] eIF-2B alpha/beta/delta-related uncharacterized proteins 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTACC CCGTTATCTG GCAAAATAAT TGTGTCTTAC TAATTGACCA AACTCGTTTA 
CCCAATGAGT ATGCAGTTGT AGAGATTCAC CGTAGTGAAG AGATGGCGCG GGCAATTCAA
ACTATGATTG TTCGGGGTGC GCCTGCGATT GGTGTGGCGG CGGCTTATGG GATGTATTTG
GGGGCGAGGG AAATTGAGAC AAGCGAACGC CAGGAGTTTC TGCAAAAATT AGAAAAAGTG
GCACAGTTAT TACGGGCTAC CCGTCCTACG GCGGTAAATT TATTTTGGGC AATTAGTCGG
ATGCTGAAAA CTGCCTATGA GACTTTAGGA ACAGTCGCCC AAATTAAAGA AAATCTCTTA
CAAACTGCCC AAGCCATCAA TGCAGAAGAC TTGCAAACTT GTCAGGTGAT CGGTGACAAT
GGCTTGGCTA TCTTACCCAA AACCCCAACA AAGCTGACAT TGCTCACCCA TTGTAATGCT
GGTGCTTTAG CTACTGCTGG TTATGGTACA GCCTTGGGGG TTGTCCGTTC AGCTTGGCGA
GAAGGGCGTT TAGAAAGGTT GTTTGCTGAT GAAACCCGTC CGCGTCTGCA AGGTGCAAAA
CTCACCACCT GGGAATGTGT ACAAGAAGGT ATTCCCGTAA CGCTAATTAC CGATAATATG
GCAGCCCATT GTATGAAGCA GGGTTTAATT GATGCTGTTG TTGTGGGTGC GGATCGAATT
GCGGCTAATG GTGATGCTGC CAATAAAATC GGCACTTATA GTTTAGCTAT AGTAGCCAAA
GCACATAATG TTCCTTTCTT TGTGGCTGCG CCTGTTTCTA CAATTGATTT TGAATTAACT
GATGGTAGTC AAATTCCCAT TGAAGAACGC AACCCAGTAG AAATTTATCA AGTCGGCGAT
ACTACTTTGA CACCTCCAGG CGTAGAATTC TACAATCCTG CATTTGATGT CACCCCAGCC
GAGTTAATTA CAGCCATCAT CACTGAGAAT GGTGCTTTTG CTCCTTGTGA TTTAACTAAA
TCTTCAAAAC AAGCGGTGGT TTAG
 
Protein sequence
MIYPVIWQNN CVLLIDQTRL PNEYAVVEIH RSEEMARAIQ TMIVRGAPAI GVAAAYGMYL 
GAREIETSER QEFLQKLEKV AQLLRATRPT AVNLFWAISR MLKTAYETLG TVAQIKENLL
QTAQAINAED LQTCQVIGDN GLAILPKTPT KLTLLTHCNA GALATAGYGT ALGVVRSAWR
EGRLERLFAD ETRPRLQGAK LTTWECVQEG IPVTLITDNM AAHCMKQGLI DAVVVGADRI
AANGDAANKI GTYSLAIVAK AHNVPFFVAA PVSTIDFELT DGSQIPIEER NPVEIYQVGD
TTLTPPGVEF YNPAFDVTPA ELITAIITEN GAFAPCDLTK SSKQAVV