| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3335 |
|---|
| Symbol | mtnA |
|---|
| ID | 3566319 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | + |
|---|
| Start bp | 3589537 |
|---|
| End bp | 3590625 |
|---|
| Gene Length | 1089 bp |
|---|
| Protein Length | 362 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637681807 |
|---|
| Product | methylthioribose-1-phosphate isomerase |
|---|
| Protein accession | YP_286534 |
|---|
| Protein GI | 71908947 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0182] Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family |
|---|
| TIGRFAM ID | [TIGR00512] S-methyl-5-thioribose-1-phosphate isomerase
[TIGR00524] eIF-2B alpha/beta/delta-related uncharacterized proteins |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 59 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.000368125 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAACATCG ACGGCATCCC CACCCGCACC CTGCGCGCCC ATCCCGACCG GCGCGCCATC
GACATCATCG ACCAAACCCG GCTGCCGCAT GCACTGCACT GGGTCCGCGT CGCCACGCTG
GAGGAGGCAG CCCACGCCAT CCGCGCCATG CAAGTGCGCG GCGCACCGCT TATTGGCGCG
ACTGCGGCTT ACGGCCTGGC CATTGCGCTT GATTTCGAGG CATCCGACCG AAGACTGGCC
GAAGCGGTCG CCTTGCTCGG CGCGACACGG CCGACGGCCG TCAATCTGCA CTGGGCGCTG
GCCCGCATGG AAAACATCCT GCGCCCCCTG GCCCCGGAGG CACGCTGCGA TGCTGCCTGG
GCCGAGGCGG CCGCCATTGC CGAGGAAGAC GTGGCGCAAA ACGCCGCCAT CGGCCAGCAC
GGCCTGAAAC TGTGGAATGA CCTGATCGTC GCTGACGGCC AGACCCTGAA CATCATGACC
CACTGCAATG CCGGCTGGCT GGCCACCGTC GACTGGGGCA CCGCGCTGTC GCCGGTCTAT
GCCGCCCACG ATGCCGGGGT GCCGGTACAT GTCTGGGTCT CGGAAACCCG CCCGCGCAAC
CAGGGCCTGC TCACCGCCTG GGAACTGGAG CAGCACGGCG TGCCGCACAC GCTGATCGCC
GACAACGCGG CTGGCCTGCT GATGCGCAAC GGCAAGGTCG ATGCGGTGAT CGTCGGCGCA
GACCGCATTG CGGCCAATGG CGACGTCGCC AACAAGGTCG GCACCTACCT GAAGGCCCTG
GCCTGCGCTG ACAACGGCAT TCCCTTCTAC GTCGCGGCAC CGCGCTCGAC CCTTGATTTC
GCCTGCCCCG AAGGCGCCAG CATCCCGATC GAGGAGCGCG ACGGCGACGA ATTCCGACTG
GTGCACGGCC TCGACAGCCG CGGCGTACCA TCCGCCCTGC GCCAGTTGCC GGCCGGTGAA
GATGTGGCCA ATCCGGCCTT CGACGTGACG CCGAACTGGC TGGTCAAGGC CATCATCACC
GAACGCGGTG TCTGCCCGGC CAGCCGTGAC GGCCTGCTGG CGCTCTATCC GGAGGAAGCA
CGTGGCTGA
|
|---|
| Protein sequence | MNIDGIPTRT LRAHPDRRAI DIIDQTRLPH ALHWVRVATL EEAAHAIRAM QVRGAPLIGA
TAAYGLAIAL DFEASDRRLA EAVALLGATR PTAVNLHWAL ARMENILRPL APEARCDAAW
AEAAAIAEED VAQNAAIGQH GLKLWNDLIV ADGQTLNIMT HCNAGWLATV DWGTALSPVY
AAHDAGVPVH VWVSETRPRN QGLLTAWELE QHGVPHTLIA DNAAGLLMRN GKVDAVIVGA
DRIAANGDVA NKVGTYLKAL ACADNGIPFY VAAPRSTLDF ACPEGASIPI EERDGDEFRL
VHGLDSRGVP SALRQLPAGE DVANPAFDVT PNWLVKAIIT ERGVCPASRD GLLALYPEEA
RG
|
|---|
| |