Gene Rsph17025_1886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_1886 
SymbolmtnA 
ID5084311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp1934767 
End bp1935855 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content69% 
IMG OID640483447 
Productmethylthioribose-1-phosphate isomerase 
Protein accessionYP_001168082 
Protein GI146277923 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0182] Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family 
TIGRFAM ID[TIGR00512] S-methyl-5-thioribose-1-phosphate isomerase
[TIGR00524] eIF-2B alpha/beta/delta-related uncharacterized proteins 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.876537 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGATCA ACGGCACCCC TTTCCGCTCG ATCTGGACCG AAGCGGGCGA AGTCCGCATC 
ATCGACCAGC GATGGCTGCC GCATGAACTC CGCATCGTTC CGCTGCGCTC GCGGGCCGAG
TTCGCCACCG GGATCCGCGA CATGTGGGTG CGGGGCGCCC CGCTGATCGG CGCCACCGCC
GCCTGGGGCA TGGCCGTGCA GATGGCCGAG GATGCCTCGG ACCGGGCGCT CTGCGAGACA
TGGGAGGTGC TGCACGAGAC GCGGCCCACC GCCATCAACC TCCGCTGGGC GCTCGACGAG
ATGAAGCGGC TTCTGGCCCC GCTGCCCCCC TCGGAACGGG CGGCCGCCGC CGCGCGCCGG
GCGGCCGAGA TCTGCGACGA GGATGTGGAG ATCAACCGCC GCATCGGCAC CCACGGCCTC
GCGCTCATCC GCGAGATCGC CGAGCGCAAG GCGGGGCGCG TCAACATCCT GACCCATTGC
AACGCCGGAT GGCTCGCCAC GGTGGACTGG GGCACCGCGA CCTCGCCGAT CTACCATGCG
ATCGAGGCCG GGATCGACGT GCATGTCTTT GTGGACGAGA CCCGGCCGCG CAACCAGGGC
GCACTGCTCA CCGCCTGGGA GATGAACTCG CACGGGGTGA GCCACGACCT GATCACCGAC
AATGCCGGCG GCCATCTGAT GCAGCATGGC GAGGTGGACA TGGTGATCGT GGGCACCGAC
CGGACCACCG CGCAGGGTGA TGTCTGCAAC AAGATCGGCA CCTATCTGAA GGCGCTGGCG
GCGAAGGCGA ACGGGGTGCC CTTCTATGTG GCCCTGCCCT CTCCCACGAT CGACTGGACG
GTGCGCGACG GCGTGAAGGA GATCCCGATC GAGGAACGCT CCGGCCTCGA GGTGACCCAT
GTGCAGGGCA AGGCCCCCGA CGGAACGGTG CTCTCGGTCC AGATCTCGCC CGACGGCACC
GGCGCGCGCA ATCCGGCATT CGACGTGACA CCGGCCACGC TGGTCACGGG CCTGATCACC
GAGCGCGGGA TCTGCGCCGC CGATGCGCGA TCCATGGCGG CCATGTTCCC CGAACGCGCC
ACAGCCTGA
 
Protein sequence
MKINGTPFRS IWTEAGEVRI IDQRWLPHEL RIVPLRSRAE FATGIRDMWV RGAPLIGATA 
AWGMAVQMAE DASDRALCET WEVLHETRPT AINLRWALDE MKRLLAPLPP SERAAAAARR
AAEICDEDVE INRRIGTHGL ALIREIAERK AGRVNILTHC NAGWLATVDW GTATSPIYHA
IEAGIDVHVF VDETRPRNQG ALLTAWEMNS HGVSHDLITD NAGGHLMQHG EVDMVIVGTD
RTTAQGDVCN KIGTYLKALA AKANGVPFYV ALPSPTIDWT VRDGVKEIPI EERSGLEVTH
VQGKAPDGTV LSVQISPDGT GARNPAFDVT PATLVTGLIT ERGICAADAR SMAAMFPERA
TA