Gene Pcar_2170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_2170 
Symbol 
ID3724862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp2531411 
End bp2532445 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content63% 
IMG OID637751771 
ProductaIF-2BI family translation initiation factor 
Protein accessionYP_357579 
Protein GI77919764 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0182] Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family 
TIGRFAM ID[TIGR00512] S-methyl-5-thioribose-1-phosphate isomerase
[TIGR00524] eIF-2B alpha/beta/delta-related uncharacterized proteins 


Plasmid Coverage information

Num covering plasmid clones81 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCATCA AGCCTATCGA ATACCGTGAC GGAGTCGTGC GCATGATCGA TCAGCGCCTG 
CTCCCCACGC AGGAGCTATG GCTCGAATAC CGTGATTACC AGGCGGTTGC CGAGGCCATC
CTTACCATGG TGGTACGTGG AGCGCCGGCC ATCGGTGTGG CGGCGGCCTA TGGCGCCGCC
CTCGGTGCCC GCGACATCGA AGCCGACAGC TTCGAGTCTT TTCTCGCCGC CTTGAAAAAC
GTCTGCGACA CCCTCGCCGC CACCCGCCCC ACGGCCGTCA ACCTGTTCTG GGCTCTTGAG
CGCATGCAAG CCAAAGCCCG CGAACTCGCT GCGCTGCCGC TGGACGCCAT CAAGGCGGCC
CTGATGGACG AGGCCCAGGC CATCGCCGCC CAGGACGATG CCATCAACCG TGCCATGGGC
CGGCATGGTG CCGAGCTCAT CGCCGACAAC GCGCGGGTGC TGACCCACTG CAACGCCGGA
GCTCTCGCCA CCGGCGGCTA CGGCACCGCG CTGGGAGTGA TCCGCGCAGC GGTGGAAAGC
GGCAAAAAAA TCAGCGTTCT GGCCGACGAA ACCCGCCCTT TTTTGCAGGG ATCCAGGCTG
ACCGCCTGGG AACTGCACAA AGATGGCATC CCCGTCACCC TGATCTGCGA CAACATGGCC
GGTGCCCTCA TGCGCCAGGG CGAAATCGAC TGCGTCATTG TCGGCGCTGA CCGCATCGCC
GCTAACGGCG ATGTCGCCAA CAAAATCGGC ACCTACAGTG TAGCGGTACT GGCCAAAGAA
CACGGCCTGC CCTTTTATGT GGCCGCCCCC CTGTCGACCA TCGACCTGAA AATTCCCGAT
GGCGATCACA TCCCCATCGA GGAACGGGAT ACCAGCGAGG TTACCCATTG CGGCCCGACC
CGATTGGCCC CCGAAGGCAT CAACGTGCGT AACCCGGCCT TCGATGTCAC CCCGGCAGGC
CTGATAACTG CTATCATTAC CGAACGCGGT GTGGTTCGGG GGGACTATGT CCGCGGCCTG
GCCAACCTCT TTTAG
 
Protein sequence
MSIKPIEYRD GVVRMIDQRL LPTQELWLEY RDYQAVAEAI LTMVVRGAPA IGVAAAYGAA 
LGARDIEADS FESFLAALKN VCDTLAATRP TAVNLFWALE RMQAKARELA ALPLDAIKAA
LMDEAQAIAA QDDAINRAMG RHGAELIADN ARVLTHCNAG ALATGGYGTA LGVIRAAVES
GKKISVLADE TRPFLQGSRL TAWELHKDGI PVTLICDNMA GALMRQGEID CVIVGADRIA
ANGDVANKIG TYSVAVLAKE HGLPFYVAAP LSTIDLKIPD GDHIPIEERD TSEVTHCGPT
RLAPEGINVR NPAFDVTPAG LITAIITERG VVRGDYVRGL ANLF