Gene Rsph17029_1050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_1050 
SymbolmtnA 
ID4897038 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp1082367 
End bp1083461 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content71% 
IMG OID640111637 
Productmethylthioribose-1-phosphate isomerase 
Protein accessionYP_001042933 
Protein GI126461819 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0182] Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family 
TIGRFAM ID[TIGR00512] S-methyl-5-thioribose-1-phosphate isomerase
[TIGR00524] eIF-2B alpha/beta/delta-related uncharacterized proteins 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.246086 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.396346 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGATCA ACGGCACCCC TTTCCGCTCG ATCTGGTGCG AGGCGGGCGA GGTCCGCATC 
ATCGACCAGC GCTGGCTGCC GCACGAGCTG CGGATTGTGC CGCTGCGCAC GCGTGCGGAG
TTCGCGGCCG CGATCCGGGA CATGTGGGTG CGCGGCGCGC CGTTGATCGG GGCCACAGCC
GCATGGGGGA TGGCGGTGCA GATGGCCGAG GATCCGTCCG ACGCTTCGCT CGCCGAGACC
TGGGAGGTGC TGCACGAGAC GCGGCCCACG GCGATCAACC TCCGCTGGGC GCTGAACGAG
ATGCGCCGCC TGCTGGCGCC CCTGCCCCCC TCCGAGCGGG CAGCCGCGGC CGCGCGCCGT
GCGGCCGAGA TCTGCGACGA GGATGTGGAG ATCAACCGCC GGATCGGCGC GCATGGCCTG
ACGCTCATCC GCGAGATCGC CGAGCGGAAG CGCGGCCGGG TCAACATCCT GACCCATTGC
AACGCGGGGT GGCTCGCCAC CGTCGACTGG GGCACCGCCA CCTCGCCGAT CTATCATGCG
CTCGAGGCGG GGATCGACGT CCATGTGTTC GTGGACGAGA CCCGGCCCCG CAATCAGGGC
GCGCTGCTGA CCGCCTGGGA GATGAACTCG CACGGGGTGA GCCACGATCT GATCGTGGAC
AATGCCGGCG GCCATCTGAT GCAGCACGGC GAGGTGGATC TCGTGATCGT CGGCACCGAC
CGCACCACCG CGCAGGGCGA CGTCTGCAAC AAGATCGGCA CCTATCTTAA GGCGCTGGCG
GCGAAGGCAA ACGGCGTGCC CTTCTATGTG GCCCTGCCCT CGCCCACCAT CGACTGGACG
GTCCGGGACG GGGTGGCGGA GATCCCGATC GAGGAGCGCT CGGGCGCCGA GGTGACCCAT
GTGCAGGGCA AGGCGCCGGA CGGGTCGGTG ATCTCGGTGC AGATCTCTCC CGACGGCACC
GGCGCCCGCA ATCCGGCCTT CGACGTGACG CCGGCTTCGC TGGTCACGGG CCTCATCACC
GAGCGCGGGA TCTGCGCGGC GGAGGCCGGC GCGATGGCGG CCCTCTTCCC CGAGGCCGCC
CGCAGCGCGG CCTGA
 
Protein sequence
MKINGTPFRS IWCEAGEVRI IDQRWLPHEL RIVPLRTRAE FAAAIRDMWV RGAPLIGATA 
AWGMAVQMAE DPSDASLAET WEVLHETRPT AINLRWALNE MRRLLAPLPP SERAAAAARR
AAEICDEDVE INRRIGAHGL TLIREIAERK RGRVNILTHC NAGWLATVDW GTATSPIYHA
LEAGIDVHVF VDETRPRNQG ALLTAWEMNS HGVSHDLIVD NAGGHLMQHG EVDLVIVGTD
RTTAQGDVCN KIGTYLKALA AKANGVPFYV ALPSPTIDWT VRDGVAEIPI EERSGAEVTH
VQGKAPDGSV ISVQISPDGT GARNPAFDVT PASLVTGLIT ERGICAAEAG AMAALFPEAA
RSAA